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Name : Amico_0996 (Amico_0996) Accession : YP_003553845.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1033695 - 1034966 bp Length : 1272 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: gsu:GSU0037 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTTGAAATCAAATGGATACGTAACAACATTGAAGAAGTGAAAGCATTTCTGGTAAACAGAAATAACGATTTCGATGT GGACAGGATAGTGATTCTTGATGAGGAAAAGAGATCCCTGCTCACTGAAACTGAAAATCTAAAAGCCCAGAGAAACGAAG GTTCCCGTAAAGTTGCAGAGGCGAAGGCTTCCGGTCAGGATGCCGATGTCCTTATGGAAGAAATGAAAAATCTTGGGCAG ATGGTAAAGGAAAAAGACAGCAAGATTGCGGAAATAGACCAGGAGCTGCAGTCCTTGCTGCTCCAGATGCCTAATCGCCC TCATGACTCCGTTCCTGTGGGTAAAGATGAAAATGACAACATGGAAGTTCGAAAATGGGGCACCCCAAAAGAATTTGTCT TTGAGCCTCAGGCTCACTGGGACATCGGGGAAAAGCTTGGAATTCTTGACTTTGAAAAGGGTGTTTCTCTTGCGGAAAGC CGTTTTACTGTCCTTAAAGGTGCTGGCGCCCGTCTTGAAAGAGCCCTGATTAATTTTATGCTCGACCTTCACACAGAACA CCATGGATATAAAGAGATACAGCCCCCCTTTATGGTTTCATCACAGACTATGCAGGGCACTGGCCAGCTTCCCAAATTTG CGGAAGACTTATACAAATGTGAGGGAGAAGACCTCTGGCTTATCCCGACTGCAGAAGTTCCTTTAACCAATCTTCATAGT GGGGAAATTCTCCCTGAAGAAGTTTTGCCTCTATATTACACAGCCTACACACCTTGCTTTAGAAAAGAAGCAGGAAGCTA CGGCAGGGATGTAAGAGGAATGATGCGTCAGCATCAGTTCGACAAAGTAGAACTTGTCAAAATAAGCAAACCGGAGAATA GTTATGATGAGCTTGAAAAACTTACAGCTAATGCAGAGGAAGTTCTGCAGAAACTGGGGCTCCCCTACAGGGTTATTACG CTTTGCACAGGAGATATGGGCTTTGGCGCAAGCAAAACCTATGACCTTGAAGTTTGGCTTCCCTTCCAGGATAAATACCG TGAAATCAGCTCTTGCAGTAATTGTGAGGATTTCCAGGCGAGGAGAATGGGAACCCGCTATAAGCCTGCCGATGGAGGAA GGCCGCGTTATGTACACACCCTTAACGGATCTGGTATTGCTGTAGGCAGAACCTTGATCGCAGTTCTCGAGAACTACCAG AGAGAAGATGGTTCTGTGGAAATTCCGGAGGCACTCGTTCCCTATATGGGCGGAATGAAAGAAATACGGTGA Protein sequence : MLEIKWIRNNIEEVKAFLVNRNNDFDVDRIVILDEEKRSLLTETENLKAQRNEGSRKVAEAKASGQDADVLMEEMKNLGQ MVKEKDSKIAEIDQELQSLLLQMPNRPHDSVPVGKDENDNMEVRKWGTPKEFVFEPQAHWDIGEKLGILDFEKGVSLAES RFTVLKGAGARLERALINFMLDLHTEHHGYKEIQPPFMVSSQTMQGTGQLPKFAEDLYKCEGEDLWLIPTAEVPLTNLHS GEILPEEVLPLYYTAYTPCFRKEAGSYGRDVRGMMRQHQFDKVELVKISKPENSYDELEKLTANAEEVLQKLGLPYRVIT LCTGDMGFGASKTYDLEVWLPFQDKYREISSCSNCEDFQARRMGTRYKPADGGRPRYVHTLNGSGIAVGRTLIAVLENYQ REDGSVEIPEALVPYMGGMKEIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-112 | 57 |
