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Name : SAR116_0412 (SAR116_0412) Accession : YP_003550739.1 Strain : Candidatus Puniceispirillum marinum IMCC1322 Genome accession: NC_014010 Putative virulence/resistance : Unknown Product : Serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 440580 - 441866 bp Length : 1287 bp Strand : - Note : - DNA sequence : ATGCATGATATCCGTTTCATCCGTGAACATCCCGATCAATTTGACGCTGCCATGAAACGGCGTAAGGTTGATATGTCGGC GTCTTCCATTCTGGAAATAGACAGCGCCCGCCGTGCCTTGCAAAGCGAACTTCAGGACATGCAGTCACGCAGGAATATTG CGTCCAAGGAGATTGGAAAGCTTAAAGCCAATGGTGGCGATGCCGATGCGCTTATTGCCGAGGTCAATGATATCAAAACG GCACTGCCCGATATTGAGACCCGCGAAGCTGATCTGGCGCATAAATTAGATTCCGTTTTAATGGAAATTCCAAATATTCT GGATGTATCAGTACCAGATGGTGATGATGAACATGATAATGAGCTAATACATTCATATGGTGACATTCCGTCCTTTAGCT TTACGCCGATTGACCATGTGGCACTTGGCGAAGGTCTGGGGCAAATGGATTTTGCCCTTGGTGCTAAGCTTGCTGGCGCA CGCTTTGTGGTATTACAAGGCCAGTTAGCACGCCTTGAACGGGCACTTGCTGCATTAATGCTTGATACACACACAAGCGA ATTTGGCTATATTGAGACAGTGCCCCCATCTTTGGTAAATAGCCAGACGATGACAGGTACTGGACAACTGCCAAAATTTG CAGAAGATCTTTATAAAACCGATGATAAATGGTTGATACCAACGGCTGAAGTGCCGCTTACAAACATTGTTGCTGGTGAC ATTCTGACGCCTGATATTCTGCCAATACGGATGACAGCTTATACTAATTGTTTCCGTTCCGAAGCGGGGTCAGCTGGGCG TGATACGCGCGGCATGATCCGTCAACACCAGTTTTCAAAAGTTGAAATGGTATCGATCAGTCACCCCGATGACTCGGCAG CTGAGCTGGAGCGCATGACCGGATGTGCTGAAGCTATTTTGCAAAAATTAGAATTGCCATACCGTGTACTTAAATTATGT AGCGGTGATACTGGCTTTTCAGCTGAACAAACCTATGATCTTGAAGTATGGCTTCCAGGTCAGGATGAGGGGCGCGGTAT GTATCGCGAAATTTCATCTTGTTCAAATTGTGGACCATTTCAGGCGCGCCGCATGAAAGCCCGCTATCGTGACAAGGACA CTGGTGAAACACAATTCTTGCATACGCTCAATGGGTCGGGTCTTGCGGTTGGTCGTACAATGATTGCCATTCTGGAAAAT GGGCAACAAGAAGATGGCACAGTATGTCTGCCGGCGGCCTTGCATCCATATATGGGGACTGATCGCCTGATTAAGCAAAG CGCATGA Protein sequence : MHDIRFIREHPDQFDAAMKRRKVDMSASSILEIDSARRALQSELQDMQSRRNIASKEIGKLKANGGDADALIAEVNDIKT ALPDIETREADLAHKLDSVLMEIPNILDVSVPDGDDEHDNELIHSYGDIPSFSFTPIDHVALGEGLGQMDFALGAKLAGA RFVVLQGQLARLERALAALMLDTHTSEFGYIETVPPSLVNSQTMTGTGQLPKFAEDLYKTDDKWLIPTAEVPLTNIVAGD ILTPDILPIRMTAYTNCFRSEAGSAGRDTRGMIRQHQFSKVEMVSISHPDDSAAELERMTGCAEAILQKLELPYRVLKLC SGDTGFSAEQTYDLEVWLPGQDEGRGMYREISSCSNCGPFQARRMKARYRDKDTGETQFLHTLNGSGLAVGRTMIAILEN GQQEDGTVCLPAALHPYMGTDRLIKQSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-83 | 50 |
