Gene Information

Name : SAR116_1915 (SAR116_1915)
Accession : YP_003552242.1
Strain : Candidatus Puniceispirillum marinum IMCC1322
Genome accession: NC_014010
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : 3.2.1.20
Position : 2116148 - 2117083 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence :
TTGGATAAAACCGCATTAATCAATCCTGAAGATAACATTCATATCGAGGGATTTTTGCAGGCGTTATCGGCTGACCGTGC
GTCGGCGGCGAATACGCTGGCGGCCTATCGGCGTGATTTGAATGATGTCGCGACTATTATGCAGGGGATTGATAAAACAT
TACATAATGCAACCGTTGATGATCTGCGACAGGCTATTCACGCTTGGCATCTGCGCCGTTTGTCGGCACGTTCGGTTGCA
CGGCGGCTTAGTGCCTTGCGGCAGTTCATGGGCTGGCTGGTCGAAGATAATATCCGCATCGATAATCCGATGCGCTGGAT
CGACAGCCCGTCGGTACCAGCACCAGCGCCCAAAAGCCTGACTGAAGCCGAGGTGATTGCCTTATTGAAAGCGGCAAATG
CCCTTGAACCTGAGGCGGCGGCGGTACGGGCGCGAGCTATTCTGGAAATATTTTATGCCACCGGCTTGCGGGTCAGCGAA
GTCGTCAAGCTTCAGGTTGCCCAATTCCGGCGGAATCCCGAAAGCCTGCTGGTGACAGGCAAAGGTGGCCGTGAACGTGT
GGTGCCGCTGGGGGATGCGGCCAAAACCGCGGTACAATATTGGATCGAGATACGGGATCGCCATGCGGCGGCACTGATGT
CGGATTATCTATTTCCAATGGGGGATGGGCCAATGACGCGTCACCAATTTGCCAGCTTGTTGAAATCACTGGCACTGGCT
GCCGGAATCAACCCCGATCGGGTTAGTCCGCATGTGCTACGCCATTCCTTTGCAACACATATGCTCAATCGAGGTGCTGA
TTTGCGAAGTCTGCAAACGCTACTTGGTCATGCTGACATTACAACCACACAGATTTATACGGCGACACGCCCCGACCGGC
TTGCTGGTCTGGTGGCTAGCGCACATCCCCTTGCCACAAAGACGCAAGATAGTTAA

Protein sequence :
MDKTALINPEDNIHIEGFLQALSADRASAANTLAAYRRDLNDVATIMQGIDKTLHNATVDDLRQAIHAWHLRRLSARSVA
RRLSALRQFMGWLVEDNIRIDNPMRWIDSPSVPAPAPKSLTEAEVIALLKAANALEPEAAAVRARAILEIFYATGLRVSE
VVKLQVAQFRRNPESLLVTGKGGRERVVPLGDAAKTAVQYWIEIRDRHAAALMSDYLFPMGDGPMTRHQFASLLKSLALA
AGINPDRVSPHVLRHSFATHMLNRGADLRSLQTLLGHADITTTQIYTATRPDRLAGLVASAHPLATKTQDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-23 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-23 42