|
Name : SAR116_0106 (SAR116_0106) Accession : YP_003550433.1 Strain : Candidatus Puniceispirillum marinum IMCC1322 Genome accession: NC_014010 Putative virulence/resistance : Virulence Product : glutamine synthetase type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 115538 - 116947 bp Length : 1410 bp Strand : - Note : - DNA sequence : ATGTCTGACGCAAAAGCTATCATGGAAATGATCCGTGAAAATGATATTACCTATGTTGATCTGCGCTTTACCGACCCGCG CGGCAAGATGCAGCATGTAACCCAGCATATCGACACAATCGATGAAGAAACATTGGCCGAAGGCTTCATGTTTGACGGTT CGTCAATCGCAGGCTGGAAAGCCATCAATGAGTCCGATATGACCTTGATGCCTGACCTGTATCGCGCCTATATCGACCCG TTCTTTGCCCAGCCGACTTTGGCATTGTTCTGTGACGTGCTGGAACCAGGTTCAGGTGCCGCCTATTCGCGCGACCCACG CGGAACAGCAAAGGCCGCTTTGACCCATATGGAAGGTCTCGGCATTGCCGATACTGCTTTCTTTGGACCAGAAGCCGAAT TCTTTATCTTTGAAGATGTCAAAATCGACGTCTCAATGAATCGTGCCATGTATCAGGTCGATTCAGTCGAAGGCCCTTAT AACGGCGCCACCGACTATCCCGAAGGCAATATGGGTCACCGTCCGGGCGTCAAAGGCGGCTATTTTCCGGTTCCCCCGCT TGATAGCGGCCAGGATATCCGTGGCGAAATGCTGACTGTCATGGCTGGTATGGGTGTTAGCGTTGAAAAGCATCACCATG AAGTGGCGCCGTCACAGCATGAGTTGGGTGTGAAGTTCGGCACCTTGCTTGAAACGGCTGACAATATGCAGCTATATAAA TATGCCGTGCATCAGGTTGCCCATGCCTATGGCGTGACGGCAACCTTCCTGCCAAAGCCGATCGCTGGCGATAACGGCTC AGGCATGCATGTGCACCAGTCACTCTGGACAGATGGCAAGCCTCTGTTTGCGGGCAATGGCTATGCTGACCTGTCTGAAA GTGCGCTTTACTACATTGGCGGCATCATCAAGCATGCCAAGTCATTGAACGCTTTCACCAACGCATCAACCAACAGCTAC AAGCGTCTGATCCCGGGTTATGAAGCCCCTGTGTTGCTGGCCTATTCGTCAAAGAACCGGTCTGCATCATGTCGTATTCC GCATGTGAATTCGCCAAATGGCAAGCGTGTCGAAGTCCGCTTCCCGGATGCAACCGCGAACCCATATCTGGCCTTCTCGG CCATGCTGATGGCTGGCCTTGACGGTATCCAGAACAAGATCCACCCGGGCGATGCCATGGACAAAGACTTGTATGATCTG CCTGCCGAAGAGCTAAAGCAGATCCCGACAGTATGTGCATCTTTGCGTGAAGCGCTTGAGTCACTTGACGCTGATCGTGC CTATCTGACCGCAGGTAACGTATTTACCGACGAACAGATCGATGCCTATATCGAGCTCAAGATGGAAGAAGTCATCGCAC TCGAGCACACACCGCATCCAGTCGAATTCCAGATGTATTACTCATACTAA Protein sequence : MSDAKAIMEMIRENDITYVDLRFTDPRGKMQHVTQHIDTIDEETLAEGFMFDGSSIAGWKAINESDMTLMPDLYRAYIDP FFAQPTLALFCDVLEPGSGAAYSRDPRGTAKAALTHMEGLGIADTAFFGPEAEFFIFEDVKIDVSMNRAMYQVDSVEGPY NGATDYPEGNMGHRPGVKGGYFPVPPLDSGQDIRGEMLTVMAGMGVSVEKHHHEVAPSQHELGVKFGTLLETADNMQLYK YAVHQVAHAYGVTATFLPKPIAGDNGSGMHVHQSLWTDGKPLFAGNGYADLSESALYYIGGIIKHAKSLNAFTNASTNSY KRLIPGYEAPVLLAYSSKNRSASCRIPHVNSPNGKRVEVRFPDATANPYLAFSAMLMAGLDGIQNKIHPGDAMDKDLYDL PAEELKQIPTVCASLREALESLDADRAYLTAGNVFTDEQIDAYIELKMEEVIALEHTPHPVEFQMYYSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 1e-110 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SAR116_0106 | YP_003550433.1 | glutamine synthetase type I | VFG1399 | Protein | 2e-101 | 50 |
