Gene Information

Name : Caka_0096 (Caka_0096)
Accession : YP_003547295.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 107931 - 109667 bp
Length : 1737 bp
Strand : -
Note : KEGG: bba:Bd3681 putative ATP-dependent helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein

DNA sequence :
ATGTATCAACTCAGGCCCTACCAACAAGAAGCAGTGGATCGTACCCTGCAGTACTTCAGGAAGCAACGCAGTCCTGCAGT
AATCGTCTTGCCCACAGGGGCGGGTAAGAGCTTGGTCATCGCGGAGCTGGCAAAGATCGCCACGGGGCGCGTCTTGGTAC
TCGCGCATGTCAAGGAGCTGGTCGAGCAGAACCATCTGAAATATGAAAGCTATGGCTTGGAAGCCGGCGTCTATTCGGCC
GGATTGCACCAAAAGGATAGTACGCAAAAGGTTATTTTCGGCAGCATCCAGTCAGTTTCAAAAGCCAAGGCTTCCTTCTT
CAATGACTTCACCCTACTGGTGATCGACGAGTGCCATCGCGTCGGCCTACAGCCCGACAGCCAGTACGCAAAAGTCATCG
AGCAGCTCCAACGCAGCAATCCGCGTATTTGCATTCTGGGCCTGACAGCGACGCCCTATCGTTTGGGACTGGGCTGGATC
TATAACACCGCCCTGCGTGGCGAAACCAAGACGGAAGAACCGCGCTTCTTTAAGTACTGCATCTACGACCTGGCGCTGGA
GTACATGATCCGCAACCGCTATCTGACACGCCCGGTAAAGGTCGACATTCCCGTCACTGCCTATGACTTCTCTGAGCTCA
CTGAAGGCGGTGCAAACTATACAATGGAACAAGTGGAAGCTGTGCTCAACCAGCAACGTCGCCTCACTCCCCTGATCCTC
AAGAACATCATCGACATCACGGAAAGCGATGGGCGCCAGGGGGTGATGATCTTCAGCGCCACCGTAAAACATGCGCAGGA
GATCATGCAGCACCTTCCCGCCGGGCAGGCCAGACTGGTGGTGGGAAGCACCGAGCTGGCCGAACGGGATCAGATCGTAG
AGGGTTTTAAACAGAAAGCCTTCAAGTATCTGGTCAATGTCTCCGTGTTAACCACCGGTTTCGATGCCGCGCATGTCGAT
GTGATTGCCATCCTTCGCCCAACTGAATCGATTAGTTTATACCAGCAAATAATCGGCCGCGGTCTACGCCTGGACAGTGA
AAAAAAGGATTGCCTGGTTCTCGACTATACCGGCATGGGGCACAGTATCTTCAGCCCGGAAATCGGTGAGACCAAGCCTG
CCTCCGAATCGGTCCCGGTTCAAGTCCCCTGTCCTCAATGCGGCTTCGTGAATGATTTCTGGGGCATCCTTGACGATGAC
GGAAAACTGTTGGAGCACTTTGGCCGCAAGTGTCGTGGCGGACACACCGATCCGCAAACCCTCAAGTTCACGCCCTGTGG
CTATCGCTTTCGCTTTAAGATCTGCAATCAATGTGGCACTGAAAATGATATCGCCGCGCGTGAATGCCATCGCTGTGGAG
GTCTGCTCATTGATGCAGACGAGAAGCTTAAACAAGCAAGACTTTCCAAAGATGCTCATGTACTCACACCCGATTCCATT
GAGATGCTCGAGCGCACGGATAAAAAAGGGACGTCCTACCTGCAGGTAAAGTACTACGATTATGACGCCCAGTTCGTCAG
CGAATTACACTATCTCAACAATCCAACCAGCCTGAAGAAATTCTCGATCAACTTTCTGCGCTCTCACCTACGCACCCCTG
AACTGAAGCTCAACATCAAGACTGTCAGTGATGTCCTACAAATCCAACCGCAGCTCCGCATGCCTGCATTCGTCATTGCC
CGCAAACAAGGCAAGTTCTGGAAGGTCACCGAGAAGATATTCAGCGAGGAGTTGTGA

Protein sequence :
MYQLRPYQQEAVDRTLQYFRKQRSPAVIVLPTGAGKSLVIAELAKIATGRVLVLAHVKELVEQNHLKYESYGLEAGVYSA
GLHQKDSTQKVIFGSIQSVSKAKASFFNDFTLLVIDECHRVGLQPDSQYAKVIEQLQRSNPRICILGLTATPYRLGLGWI
YNTALRGETKTEEPRFFKYCIYDLALEYMIRNRYLTRPVKVDIPVTAYDFSELTEGGANYTMEQVEAVLNQQRRLTPLIL
KNIIDITESDGRQGVMIFSATVKHAQEIMQHLPAGQARLVVGSTELAERDQIVEGFKQKAFKYLVNVSVLTTGFDAAHVD
VIAILRPTESISLYQQIIGRGLRLDSEKKDCLVLDYTGMGHSIFSPEIGETKPASESVPVQVPCPQCGFVNDFWGILDDD
GKLLEHFGRKCRGGHTDPQTLKFTPCGYRFRFKICNQCGTENDIAARECHRCGGLLIDADEKLKQARLSKDAHVLTPDSI
EMLERTDKKGTSYLQVKYYDYDAQFVSELHYLNNPTSLKKFSINFLRSHLRTPELKLNIKTVSDVLQIQPQLRMPAFVIA
RKQGKFWKVTEKIFSEEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01052 YP_001437156.1 hypothetical protein Not tested Not named Protein 4e-154 53