Gene Information

Name : Caka_3035 (Caka_3035)
Accession : YP_003550218.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 3649172 - 3650575 bp
Length : 1404 bp
Strand : +
Note : KEGG: ote:Oter_4045 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase

DNA sequence :
ATGTCAGATGCGAAGAAACAAGCCACTTGGGGGGGACGCTTTTCAGAAGGTCCTGCTGAACTGATGCTCCGGATCGGAGA
GTCCGTTTCCTTTGATCAGAAACTGGCCCGCTTTGATGTGCAGGGGAGTAAGGCCCAGTCGGCGATGTTGGCACATGTCG
GAATCATTACGGATGACGAGCGTGATGCGATTCATGCTGGCTTGGACGCTATCCTTGAGGAGGTAACTGCGGGACAGTTT
AATTGGGATATGGCGCTTGAGGATGTTCACATGAATATCGAGCAGGCGCTCACGGATCGGGTGCCTGCCGCGGCAAAGTT
GCATACGGCCCGTAGCCGAAATGATCAGGTTGCGACCGACATGCGTCTCTGGTTCCGCGATGCTTGTGAGCAAGTTCTGG
CATCCCTTACTGCGGTGATTGAGTCGCTGGTAGATCTCGCTGATCGTAGCAAGGAGACCATTATCCCCGGTTACACGCAC
TTGCAGCGGGCGCAACCGGTTTCGATGGCGCATCACTTATTGGCGTACGTGGAAATGTTCAATCGTGACCGGGTTCGTGT
GCGTGCGGTTCGTGAGCAGGCGAATGTATGCCCTCTCGGTTCGGGGGCGATCGCGGGGACGACGCTACCGATTGATCGGG
AATTCGTTGCGCGCGAGTTGGGCTTTGTAGATGCCGATGACAACCCGCGGATCACACAGAACAGCATGGATGCAGTCAGT
GACCGTGACAGCTTTATCGACTTTGCATCGGCGTGTGCGACGATTGGCGTACACCTGTCGCGTCTGTCCGAAGACTTTAT
TCTGTGGAGTAGTGCAGAATTCAGCTTTGTGCGTTTGCCGGATGCGTTTACGACGGGTTCCAGTTTGATGCCGCAGAAGA
AAAATCCGGATGCCTTTGAATTGATTCGTGGCAAGTCGGCACGTTTGACGGGCAATCTGCAGATGCTACTGACGATGGTG
AAAGGCTTACCTTTGACCTACAATCGCGACCTGCAAGAGGACAAGCCGCCCGTATTTGATTCTCTGGAGCAGACACTGCT
GATCCTAGATTCAGTTGCGGCTTGCATGCCGGGGGTGACCGTCAATGAGTCGAAGTGTGCGGAAGCCGTTGCCGATCCGG
CTTTGTTGGCCACGGATGTAGTCGATTATCTGGTTGAGAAGGGCGTGCCCTTCCGCGAGGCACACCATGTGGTTGGCGCA
CTGGTCGGTTTGTCTGAGAAACTCGACACACCGCTCCACGAATTGCCCTATGAACAGGTTACGCCGATTCATACCGCACT
CGGTGAAGACTGGAATTCGGTGTTTGATCTGAAGCGTGCGCTGGATGCCCGTGAAAAGCCTGGGATGCCAGGCCCGAAGC
AGGTCGCAGCACGTATCGCATACTGGCGTAGTCTGGAGGATTAA

Protein sequence :
MSDAKKQATWGGRFSEGPAELMLRIGESVSFDQKLARFDVQGSKAQSAMLAHVGIITDDERDAIHAGLDAILEEVTAGQF
NWDMALEDVHMNIEQALTDRVPAAAKLHTARSRNDQVATDMRLWFRDACEQVLASLTAVIESLVDLADRSKETIIPGYTH
LQRAQPVSMAHHLLAYVEMFNRDRVRVRAVREQANVCPLGSGAIAGTTLPIDREFVARELGFVDADDNPRITQNSMDAVS
DRDSFIDFASACATIGVHLSRLSEDFILWSSAEFSFVRLPDAFTTGSSLMPQKKNPDAFELIRGKSARLTGNLQMLLTMV
KGLPLTYNRDLQEDKPPVFDSLEQTLLILDSVAACMPGVTVNESKCAEAVADPALLATDVVDYLVEKGVPFREAHHVVGA
LVGLSEKLDTPLHELPYEQVTPIHTALGEDWNSVFDLKRALDAREKPGMPGPKQVAARIAYWRSLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 4e-93 48
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 4e-93 48