|
Name : Caka_3010 (Caka_3010) Accession : YP_003550193.1 Strain : Coraliomargarita akajimensis DSM 45221 Genome accession: NC_014008 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 3625346 - 3626104 bp Length : 759 bp Strand : - Note : TIGRFAM: ribonuclease PH; KEGG: ote:Oter_4210 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 DNA sequence : ATGTCCGACACCACAACACCACCCTTTGCGCGCCCGGATCAGCGCGCGGTCGATCAACTCCGCCCGATTCATTTCGAAAC CGGCATCGCACCCCACGCTCTCGGCTCGGTACTGGTCAGCTTTGGCCAGACACGCGTCATCTGCGCGGCCTCAATCGATA AGAAAGTGCCCGGCTGGATGCGCGCTCAAGGTGTCGAGGGTGGCTGGATGACGGCCGAGTATTCGATGCTCCCCTACAGT ACCCTGGATCGGAAACCACGCGACATTTCACGCGGCAAAGCAGATGGCCGAACCATCGAAATCCAACGACTCATTGGACG CTCCCTCCGAGCAGTCTTTGACCTGAAGAAGCTACCGGGAAGAACTATCTGGATCGACTGCGACGTACTTCAGGCCGACG GCGGCACACGAACCGCGTCGATCAGTGGAGCGTATGTCGCCGCACAAATTGCAGTCCAAAAACTCATCGCTGCTGGTGAG CTGGAAGCGAATCCATTTACCGATTCCGTTGCCGCAATTTCAGTTGGCGTCTTTCAGGACACCCCGGTACTGGACCTTAA CTACCCTGAAGACAAAGACGCGAGTGTGGACGCGAATATCGTGATGACGGGCACCGGCAAATATGTCGAAGTTCAAAGTT CCGGTGAGGAGGCTACTTTCGATCGAGCTGAGCTGGACACACTATTGGAGCTTGGCGCTAAAGGCATTCAGGAGCTCAGT GCATTGCAACAGCAGGCCATTGAGGCCGGTCTTAGCTAG Protein sequence : MSDTTTPPFARPDQRAVDQLRPIHFETGIAPHALGSVLVSFGQTRVICAASIDKKVPGWMRAQGVEGGWMTAEYSMLPYS TLDRKPRDISRGKADGRTIEIQRLIGRSLRAVFDLKKLPGRTIWIDCDVLQADGGTRTASISGAYVAAQIAVQKLIAAGE LEANPFTDSVAAISVGVFQDTPVLDLNYPEDKDASVDANIVMTGTGKYVEVQSSGEEATFDRAELDTLLELGAKGIQELS ALQQQAIEAGLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-57 | 51 |
