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Name : Caka_3007 (Caka_3007) Accession : YP_003550190.1 Strain : Coraliomargarita akajimensis DSM 45221 Genome accession: NC_014008 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 3623984 - 3624349 bp Length : 366 bp Strand : + Note : KEGG: aoe:Clos_1468 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 DNA sequence : ATGAGCCAAGCAATCCTCGAAGACATCACGAAAGAACAACTATTGGACGACCGCGCCGAGTTCAAGGTCGGTGACGGTGT ACGCGTCCACCTGAAGGTTCAAGAAGGTAACAAGACTCGTATCCAGGTGTTTGCTGGTATCGTAATCGCTCGCAAGGGTG GTGGTATCGCTGAGACCTTCACAGTTCGCCGCATCGCTTCTGGTGTTGGTGTGGAGAAGGTATTCCCTGTACACAGCCCA ACCATCGAGAAGGTGGAAGTCGATCGTGAGTCCGTTACCATGCGCGCACGTATGTACTACATGCGCGACCGTATTGGTAA GGCAGCCAACCAAGTTAAGGAAAAGCGTCTGGTTGACGCCAAGTAA Protein sequence : MSQAILEDITKEQLLDDRAEFKVGDGVRVHLKVQEGNKTRIQVFAGIVIARKGGGIAETFTVRRIASGVGVEKVFPVHSP TIEKVEVDRESVTMRARMYYMRDRIGKAANQVKEKRLVDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-26 | 55 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-21 | 44 |
