Gene Information

Name : Caka_2945 (Caka_2945)
Accession : YP_003550128.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 3558570 - 3560573 bp
Length : 2004 bp
Strand : -
Note : KEGG: ote:Oter_3805 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region

DNA sequence :
ATGGATACTGCGACTGCTTCACAAGACGCACTATTAACCCAAGCCGCGACTCAAGCACGCGGCCTCGCGATCGACGCGAT
TCATGCCTGCAGCTCTGGGCACCTTGGTCTTCCACTTGGATGTGCTGAAATCGGCGCGGTCCTTTACGGCGGCGGTGGCC
TTCGCTACAATCCGGCCGCACCAAAATGGCTGAACCGTGACCGTTTCATCCTCTCCGGTGGCCATGGTTCCATGTTCGCC
TACTCCTGGTTACACATCGCCGGCTACGAACTCTCCCTTGAGGAAGTGAAGAATTTCCGCCAATTGGGTTCCGAAACTCC
AGGCCACCCGGAATTCGGGGATACGGTTGGCGTCGAAGCCACCACCGGACCACTCGGTCAAGGTATCGGCAACGCCGTGG
GATATGCACTTTCCGGCAAACGTGCCGCTGCGAAGTTCAACACCGCGGAACATGCCATCTTTGATCACCACGTCTTTGCA
CTCCACGGAGACGGCTGCCTTCAGGAAGGTGTTGCCAAGGAAGCGATCGCATTCGCAGGCCACAACCAACTGGACAATCT
GATCCTGATCTACGACTCCAATGACGTCACACTCGACGCCATGGCAGAGCGCACACAAAGCGAAAATGCCGAGGCCTACT
TTGTTTCCCAGGGCTGGGAAGCCGTGACGATCGACGGTCACGACCTTCAGGCGATCAACGAGGCGATCGCGACCGCAAAG
GGTAACGACAACGGCAAGCCCAAGGTCATCATCGCCAAGACCACCATCGGCAAGGGAATCCCCGAGGTCGAAGGCACGTC
TGCCGGCCACGGTGAAGGTGGCGCAAAGTTCGCCGAAACGGCACGCCAAGGCTTGGGCCTCCCAGCAGAAACCTTTTACG
TGTCAGACGAAGTACGCGCCTTCTTCAAGGACAATGCCGCCAACGCACAAAGCGTCTATGCCGCTTGGCAGTCCACTTAC
GATGCCTGGAAGTCCGCGAATCCTCAGCTCGCTGCTGAACTCGAAGCGGGTGTCGCGGACGAGATTCCAAGTGACCTGAT
CAACCGCATCCCCGAATTTGACGCCGGCACGGGCGGCGCAACACGCGCAACCGGCGGTACGGTGATCCAGTCGGTTGCCA
AGGAAGTCCCACACTTTATCACCGGTTCAGCGGACCTTTATGGCTCCACCAAGAACTACATCAAGGATGCCGGTGACTTT
GGTCCGGACAACTTTGCCGGCCGGAACATTTGGTTCGGTATTCGCGAGCATGCCATGGGGGCCATCTGCAATGGTATCGC
CTATGACGGAATCTTCCGCGCAAGTGGTGCAACCTTCCTCGTATTCGCAGACTACCTTCGCCCATCCATCCGCCTGGCCT
CGCTCGCCAAGCTTCCGGTAAGCTATATCTTCACACACGACTCCGTCGGTGTCGGTGAAGACGGTCCAACACACCAGCCG
GTTGAAACCGTGAGCGGTCTGCGCGTGATCCCGAACCTCGACGTGATCCGCCCATCCGATGCTGAAGAGGTTGCCGGCGC
CTACACCGCCGCCATGGAGCGCAAGGATGGCCCAACAGCCCTCATTTTCACCCGTCAGAATGTCCCCGCCAACGACAGCT
TAAGCGCTGCTGAACGTCGTGAAGGCGTGCTCAAGGGTGGCTACATCGCCAAGAAAGAAACGGGTGAGCTCAAGTTGATC
CTCATGGCAACTGGTTCCGAACTTCAACACGCACTCGGCGCCGCAGAACAACTCGGTGCGGGCGTACGTGTCGTTTCCAT
TCCTTGCTTCGAGCGCTTCGATCGTCAGTCTGCCGACTACATCGAAAGCGTTCTGCCACTGAGCTGCAGCGCACGTGTCG
CTGTCGAGGCCGGTGTTTCCAGCACCTGGGGCAAGTATGTCGGCCTTGCAGGCAAGACCGTCTGCATCGATCGCTTCGGG
ATCTCGGCTCCGGGTGGCACCGTCATGCAGGAACTCGGCATGACCGCAGACAATGTCGCCGCAGTCGCCAAGGAACTGAT
CTAA

Protein sequence :
MDTATASQDALLTQAATQARGLAIDAIHACSSGHLGLPLGCAEIGAVLYGGGGLRYNPAAPKWLNRDRFILSGGHGSMFA
YSWLHIAGYELSLEEVKNFRQLGSETPGHPEFGDTVGVEATTGPLGQGIGNAVGYALSGKRAAAKFNTAEHAIFDHHVFA
LHGDGCLQEGVAKEAIAFAGHNQLDNLILIYDSNDVTLDAMAERTQSENAEAYFVSQGWEAVTIDGHDLQAINEAIATAK
GNDNGKPKVIIAKTTIGKGIPEVEGTSAGHGEGGAKFAETARQGLGLPAETFYVSDEVRAFFKDNAANAQSVYAAWQSTY
DAWKSANPQLAAELEAGVADEIPSDLINRIPEFDAGTGGATRATGGTVIQSVAKEVPHFITGSADLYGSTKNYIKDAGDF
GPDNFAGRNIWFGIREHAMGAICNGIAYDGIFRASGATFLVFADYLRPSIRLASLAKLPVSYIFTHDSVGVGEDGPTHQP
VETVSGLRVIPNLDVIRPSDAEEVAGAYTAAMERKDGPTALIFTRQNVPANDSLSAAERREGVLKGGYIAKKETGELKLI
LMATGSELQHALGAAEQLGAGVRVVSIPCFERFDRQSADYIESVLPLSCSARVAVEAGVSSTWGKYVGLAGKTVCIDRFG
ISAPGGTVMQELGMTADNVAAVAKELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-109 43
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-105 41