Gene Information

Name : Caka_2692 (Caka_2692)
Accession : YP_003549877.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3259474 - 3261399 bp
Length : 1926 bp
Strand : +
Note : KEGG: mmb:Mmol_0035 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGGCCGAAGAAATCAACTCCAAGCACACTCTTTTTCCGAACTCCGATCGTATTTACGTCGAGGGTTCCCGTCCGGACAT
TCGCGTGCCGATGCGCGAGATCAAGCTCTCGCCGACCAACCTGCCCAACGGTGCGGGTCAGTCACCGAACGAACCGGTTC
GCGTGTATGACACCTCCGGTCCTTGGGGCGATCCTTCCTATACCGGCGATGCGACTTCCGGTTTGCCGCGTATGCGCGAA
GCCTGGATTCAAGAGCGTGCGGACGTCGAGGCCTATGATGGTCGTGAGGTGAAGCCACAGGACGACGGTTATCTCTCCGA
GGTGCACAAGGCCAGCGCACGCCTGAAAGACGGTGAGCGCAAGCTGATTGAATTTGAGAACAAGCCGAAGCGCCCGCTGC
GAGCCAAGGAGGGCAAGGTGGTGACTCAGTTGCAGTACGCACGTGCGGGGATTATCACGCCGGAAATGGAGTTCATCGCG
ATTCGCGAAAACATGAAGCTGCAAGCAGCCAAGGCGGGTGTGGAGATGTCGGCCGAGGCCGATGCGAATACCCTTGGTAA
GCAGCATCCCGGTCAGAGCTTTGGTGCGTCGATTCCGGATGAAATCACACCCGAGTTCGTGCGCTCGGAAGTCGCTCGTG
GCCGTGCGATCATTCCCTGTAATGTGAACCACCCGGAGCTCGAGCCGATGATTATCGGCCGTAATTTCCTCGTTAAGATC
AACACCAATATCGGTAATTCTGCGGTGGCGTCCTCCATCGAAGAGGAAGTCGAGAAGATGCGTTGGTCGGTGAAGTGGGG
TGGTGACACGCTGATGGATTTGTCCACCGGTAAGAATATTCACCAGACCCGTGAGTGGATTCTGCGCAATTGCCCGGTTC
CGGTTGGCACCGTGCCCATCTATCAAGCACTGGAAAAGGTTAACGGCAAGGCCGAGGACCTGACCTGGGAAATCTTCCGC
GATACCCTGATCGAACAGGCTGAGCAGGGTGTGGACTACTTCACCATCCATGCCGGCGTTTTGCTGCCGTATGTTCCGCT
GACTGCCAAGCGCATGACCGGTATCGTCAGTCGTGGTGGTTCTATTATGGCGAAGTGGTGCCTGTCGCATCACAAGGAGA
ACTTCCTCTATACCCACTGGGATGACATTTGTAAGATCATGGCAGCCTACGATGTCAGCTTCTCGATTGGTGACGGCTTG
CGTCCGGGATCGGTTGCGGATGCCAATGACGAGGCACAGTTTGCCGAATTGAAGATTCAAGGTGAGCTCACTCGACGCGC
ATGGGAGTTCGGTGTACAGGTCATGAATGAAGGTCCGGGCCATGTGCCGATGCACATGATTCAGGAGAACATGGAGAAGC
AATTGGAGTGGTGTGACGAAGCGCCATTCTACACGCTTGGGCCACTGACCACCGATGTGGCTCCCGGCTATGACCACATC
ACCAGTGGTATTGGTGCCGCGCTCATTGGCTGGTATGGCTGTGCGATGCTCTGTTACGTGACTCCGAAGGAACACCTTGG
CTTGCCGAATAAGGATGATGTTCGCGAGGGTGTGATTACCTACAAGATTGCAGCGCACGCAGCCGATTTGGCGAAGGGAC
ACCCGGCTGCCCAGTTGCGTGACAACGCGCTGTCCAAGGCGCGCTTCGAATTCCGTTGGGAGGATCAGTTCAATCTTTCG
CTCGATCCGGAGAAGGCAAAGTCCTTCCACGACGAAACCCTGCCTCAGGATGCGGCGAAGACTGCGCACTTCTGCTCGAT
GTGTGGCCCGAACTTCTGTTCAATGAAGATCACTGAGGATGTTCGCCAATATGCGGCCAAACTGGGTGTGTCGGAACAGG
AAGCCTTGGAGCAGGGGATGCAGGAGAAGGCCGCCGAGTTCAAGGACAAGGGCGGCGAAGTGTATCTTGCTGAGACCGAA
GCATGA

Protein sequence :
MAEEINSKHTLFPNSDRIYVEGSRPDIRVPMREIKLSPTNLPNGAGQSPNEPVRVYDTSGPWGDPSYTGDATSGLPRMRE
AWIQERADVEAYDGREVKPQDDGYLSEVHKASARLKDGERKLIEFENKPKRPLRAKEGKVVTQLQYARAGIITPEMEFIA
IRENMKLQAAKAGVEMSAEADANTLGKQHPGQSFGASIPDEITPEFVRSEVARGRAIIPCNVNHPELEPMIIGRNFLVKI
NTNIGNSAVASSIEEEVEKMRWSVKWGGDTLMDLSTGKNIHQTREWILRNCPVPVGTVPIYQALEKVNGKAEDLTWEIFR
DTLIEQAEQGVDYFTIHAGVLLPYVPLTAKRMTGIVSRGGSIMAKWCLSHHKENFLYTHWDDICKIMAAYDVSFSIGDGL
RPGSVADANDEAQFAELKIQGELTRRAWEFGVQVMNEGPGHVPMHMIQENMEKQLEWCDEAPFYTLGPLTTDVAPGYDHI
TSGIGAALIGWYGCAMLCYVTPKEHLGLPNKDDVREGVITYKIAAHAADLAKGHPAAQLRDNALSKARFEFRWEDQFNLS
LDPEKAKSFHDETLPQDAAKTAHFCSMCGPNFCSMKITEDVRQYAAKLGVSEQEALEQGMQEKAAEFKDKGGEVYLAETE
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 68
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 68
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 67