Gene Information

Name : Caka_1813 (Caka_1813)
Accession : YP_003549002.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Unknown
Product : thioredoxin reductase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0492
EC number : -
Position : 2200923 - 2201852 bp
Length : 930 bp
Strand : -
Note : KEGG: ote:Oter_4165 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

DNA sequence :
ATGGAAGACGTCATCATCCTCGGAACTGGCTGTGCAGGCCTGACTGCAGCCATTTATACTGGCCGCGCAAATTTAAGCCC
TCTGGTACTGGAAGGTACTCAGCCTGGCGGACAGTTGACTACGACTTCGGAAGTGGAGAATTTCCCCGGATTTCCTGAGG
GTATTGATGGTTTTACGCTGATGGACAACCTCCGCAAACAAGCCTCTCGTTTCGGCGCGCGCTTTGAGCACGCGAAGGTC
GACAAGATTGAAGTCGAGGGCGATGTGAAGAAGCTGATTGCGGGTGATAAGGTCTATGAGGCCAAAACTGTAATTATTGG
AACAGGCGCGCGTCCGCGTTTGCTGGGTATTCCAGGTGAGCTGGAAATGTTCGGAGGCAAGGGTGTGACAACCTGTGCAA
CCTGCGATGGTGCTTTTTACCGTGATATGGAGGTCGTTGTTGTCGGTGGTGGTGATTCTGCTTGCGAGGAGGCCTTGTTC
CTCACCCGTTTTTGCTCGAAGGTCACTTTAGTTCATCGTCGCGATGAGTTGCGTGCGTCCAAGATTATGGCGGATCGAGC
GGTTAATCATGAGAAAATCGAGATGGCATGGAACTCCTTGCCTCAGGAAGTGCTTGCCGATGAGCAAGGCTTCACTCGTG
CCTTGTTGGTGAAGGATGCGGAGTCTGGTGAGGAGCGTGAGATCCCGTGTAAGGGTGCGTTTATCGCGATCGGTCACATC
CCGAATACCGATTTCGCTGAGGGTATTCTAGAACGTGATGCAGAAGGATATATTGTTCCTGTGCTCGGAAGTCAGGTGCT
GACCAAGGTGCCGGGGCTCTTTGCTGCCGGTGACTGTGTGGATCATGTCTATCGTCAGGCGATCAGTGCGGCCGGTATGG
GATGCCAAGCAGCAATTGAGGCTGAACGCTGGTTGTTGGAACAGTCTTAG

Protein sequence :
MEDVIILGTGCAGLTAAIYTGRANLSPLVLEGTQPGGQLTTTSEVENFPGFPEGIDGFTLMDNLRKQASRFGARFEHAKV
DKIEVEGDVKKLIAGDKVYEAKTVIIGTGARPRLLGIPGELEMFGGKGVTTCATCDGAFYRDMEVVVVGGGDSACEEALF
LTRFCSKVTLVHRRDELRASKIMADRAVNHEKIEMAWNSLPQEVLADEQGFTRALLVKDAESGEEREIPCKGAFIAIGHI
PNTDFAEGILERDAEGYIVPVLGSQVLTKVPGLFAAGDCVDHVYRQAISAAGMGCQAAIEAERWLLEQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trxB AFC76431.1 TrxB Not tested AbaR5 Protein 1e-54 45
trxB CAJ77014.1 thioredoxin reductase Not tested AbaR1 Protein 9e-55 45