Gene Information

Name : Caka_1766 (Caka_1766)
Accession : YP_003548955.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 2149027 - 2149464 bp
Length : 438 bp
Strand : +
Note : KEGG: ote:Oter_3671 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence : 
ATGACTAAACCAAAAGTACTCATTCTCTGCACTGGCAACTCCTGCCGCAGTCACATGGCTGAGGCCATTTTACGCAACGC
CGCAGGCGATCTCTTCGAGGTCTTCAGTGCTGGCTCCAAGCCCAAGGGCGAAGTGCATCCACTTGCACTACAAGCGATCC
AAGAACTCGGCATCAGCACCGAAGGCCACACCTCCGACCACCTCGACCAATATCTTGACGCCGGAATCACTACAGTGATC
ACCGTTTGCGGCAACGCCGATCAGGTTTGCCCAACCTTCCCGGGCATGGTGAATCGCTATCACTGGGGCTTCGAAGACCC
CCCCCACGCCCAGCGTGACGGTGAAAGCGAAATCGACGCCTTCCGCCGCATTCGCGACGAAATCAAGCTCGTCTTTGAAG
CGTATGCGGCAGGCTACCGCGAAGCACTGAACGCATAG

Protein sequence : 
MTKPKVLILCTGNSCRSHMAEAILRNAAGDLFEVFSAGSKPKGEVHPLALQAIQELGISTEGHTSDHLDQYLDAGITTVI
TVCGNADQVCPTFPGMVNRYHWGFEDPPHAQRDGESEIDAFRRIRDEIKLVFEAYAAGYREALNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC AFC76434.1 ArsC Not tested AbaR5 Protein 7e-19 41
arsC CAJ77017.1 arsenate reductase Not tested AbaR1 Protein 5e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caka_1766 YP_003548955.1 protein-tyrosine phosphatase BAC0580 Protein 9e-22 41
Caka_1766 YP_003548955.1 protein-tyrosine phosphatase BAC0581 Protein 8e-20 41