|
Name : Caka_1449 (Caka_1449) Accession : YP_003548638.1 Strain : Coraliomargarita akajimensis DSM 45221 Genome accession: NC_014008 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1806048 - 1807781 bp Length : 1734 bp Strand : - Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: ote:Oter_3083 type II secretion system protein E DNA sequence : GTGACCTCAGCTGACGATTTCGTTCTCCAGCTCCTACTAGACAAGGCCCTCGTCGATGATGCGGCCATCGAATCTGCTCG CGCAAAAGTTGCGGATGAGCAAATCGATGGTGATCCGGATTCGGCAACTCTCGATGTGTTGACGCGCGACCACGTAGTTT CGCAGATGCAAATTGCAGAGGCGCTTGCCGAAGAATTTAGTATGGAAGTTGTCGATCTGACTGATGTGCGCACCTCTGGT GATGCACTCGAGATCATCAATTATGATATAGCGAATCGCTATAAGGTGTTCCCACTGGAAGTGGATGACACCGAAGTGGA ATTGGCTATTTGTGACCCCTTGGATATGGATGCGATCGATAGCATCAGCCACGTGGTCAAGCGTACGATTAATACGCGTA TTGCGCCGCTCGACGATATTGAGCGTGCGATTCATCAGTACTACGACGGTGCCACGGTCACCGATGTGGATGACATTCTG TCGTCGATGCCGGGTAGTGAGGCCGATGAGGATGCTCCGGATCTGGATTTGCCGACTGGTGAAGAAGCTGGAGTCGGTGA GGAAGAGGCGCCGATCATTCGCTATGTGCACATGGTTATTTCCGAGGCGCTCCGCCGTCGAGCATCGGATATTCACATGG AGCCACTCGAAAAACGCTTCCGTGTGCGCTACCGCATTGATGGTGTGTTGCATGAGGTGGAAAATCCGCCAAAGCGTTTA CAGCCTTCAATCGTCTCTCGTATCAAATTGATGTCGAACGTCAGTATCGCTGAAAAGCGGGTACCTCAGGATGGTCGTAT CAATATCAAGGTTGGTGCGAAGGTGATCGATTTGCGCGTATCGACCCTGCCGACTGCCTTTGGTGAGAGTATCGTTATGC GTATTCTCGACAAGGAAGGCTTGAATTTGGGGCTGCCACAGCTGGGTTTCTTCAGTGATGACCAAGCGACCTTCGAACGG ATTATTGCGCTTCCTGACGGTATTTTCCTCGTCACCGGTCCGACTGGTTCGGGTAAGTCGACGACACTCTACTCCGCGTT GAATTACATCAATCACCCCGACCGTAAGATCATCACCGTTGAGGATCCGGTGGAGTATGAGATGGCGGGCATCAATCAGG TGCAAGTTAAACGCGAGGTGGGTATGACCTTCGTGGCGGCGTTGCGCTCAATGCTTCGCCAGGCGCCCAACATTATCATG GTTGGGGAAATCCGGGATAAGGAAACTGCTGAGATTGCGGTGAATGCCTCGCTAACCGGTCACATGGTGTTTAGTACCTT GCACACCAATGATGCTCCTAGCGCAGTGAGTCGTTTGGTCGACATTGGCATTAAGCCATTCTTGGTGTCCGCTTCGCTTC GCGCGGTTTTGGCGCAGCGCTTGGTGCGTCGTACCTGTGCTGAATGTAAAGCTCCTGACGAGCCAGATCCACGTCTGTTG AATTCACTGGGCATTCGACCCGACCAGACTGACGATGCGCAGTTTGCTCGTGGTAAGGGTTGTTCGAAGTGCAATTCCAC CGGTTTCCGTGGTCGTGTTGGTATTTTCGAGATGTTCACGATGAACGAAGAATTGCAGCAAATGGTCTACGAAGAAGCCA GTTTGGTCGCCCTACGGAACAAGGCTCGTGAAATGGGCATGCGTACCATGCGTGAAGATGGCGTTCGTAAGATTCTCGCG GGTGTGACGACTGCTGAAGAAGTGCTGCACGTGACTGTTGCGGATCCGACTTAG Protein sequence : MTSADDFVLQLLLDKALVDDAAIESARAKVADEQIDGDPDSATLDVLTRDHVVSQMQIAEALAEEFSMEVVDLTDVRTSG DALEIINYDIANRYKVFPLEVDDTEVELAICDPLDMDAIDSISHVVKRTINTRIAPLDDIERAIHQYYDGATVTDVDDIL SSMPGSEADEDAPDLDLPTGEEAGVGEEEAPIIRYVHMVISEALRRRASDIHMEPLEKRFRVRYRIDGVLHEVENPPKRL QPSIVSRIKLMSNVSIAEKRVPQDGRINIKVGAKVIDLRVSTLPTAFGESIVMRILDKEGLNLGLPQLGFFSDDQATFER IIALPDGIFLVTGPTGSGKSTTLYSALNYINHPDRKIITVEDPVEYEMAGINQVQVKREVGMTFVAALRSMLRQAPNIIM VGEIRDKETAEIAVNASLTGHMVFSTLHTNDAPSAVSRLVDIGIKPFLVSASLRAVLAQRLVRRTCAECKAPDEPDPRLL NSLGIRPDQTDDAQFARGKGCSKCNSTGFRGRVGIFEMFTMNEELQQMVYEEASLVALRNKAREMGMRTMREDGVRKILA GVTTAEEVLHVTVADPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-85 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-85 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Caka_1449 | YP_003548638.1 | type II secretion system protein E | VFG0182 | Protein | 2e-92 | 46 |
| Caka_1449 | YP_003548638.1 | type II secretion system protein E | VFG1876 | Protein | 1e-83 | 46 |
