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Name : Caka_1423 (Caka_1423) Accession : YP_003548612.1 Strain : Coraliomargarita akajimensis DSM 45221 Genome accession: NC_014008 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 1775828 - 1777132 bp Length : 1305 bp Strand : + Note : TIGRFAM: xylose isomerase; KEGG: rba:RB2658 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel DNA sequence : ATGCAATACTTCGACTGCGATAAAATCCAATACGAAGGACCTAGTTCCAAGAACCCGCTTGCGTTCAAGCATTACAACCC GGAAGAGCTTGTCGACGGCAAGCCAATGAAGGAGCACCTGCGTTTTGCAGCTCCGTACTGGCACGTCATGCGCAACGAGC TGGCTGACCCATTTGGTGGCGGCACTGCGCAAATGCCATGGGATGACGGTTCGAACTCCACCGAAAACGCACTCAAGCGC GTCGACGTCTTCTTTGAGTTCCTTGAAAAGATTGGCATCGACTACTACTGCTGGCACGACCGTGACATCGCTCCGGAACT CAGCGACCTCTCCGCTTCCAACGCGGCCCTCGACGCGGTGGTAGCCAAGCTCAAGGAAAAGCAAAAGGAAACCGGCGTGA AGCTCCTCTGGGGTACTGCCTGCCTGTTCTCCCACCCACGCTACTCCCAGGGCGGTGCTACCTCCCCGGACATGAACGTC TTCACCTATGCAGCAGCACAGGTGAAGAAGGCCCTTGAGTGCACCAAGGAACTGGACGGTCTCGGTTACACTTTCTGGGG CGGCCGCGAAGGTTACGCGACACTGCTCAACACCGACATGAAGCGCGAACTCGACCACCTTGCAGCCTTCCTGCACATGG CAGTCGACCACGCGAAGAAGATCGGTTTCGACGGCCCGTTCTACATCGAGCCAAAGCCACGCGAGCCATCCACTCACCAA TACGATTCCGACTCCGCAGCCTGCTTGAACTTCCTGCGTGAGTACGGTTTGATGGACAAGTTCCGCCTGAACATCGAAAC CAACCACGCCACACTGGCTGGCCACACAATGGAGCACGAGCTCACTGTGGCCATGAATGCCAACATGCTGGGCAGTATCG ATGCGAACCGCGGTGACGAACTCATCGGCTGGGACACCGACCAATTCCCAACCGACATCTACCTGACCACACAAGTAATG CTTTGTGTTCTGGAAATGGGTGGTTTCACCACAGGTGGCCTGAACTTTGACGCCAAGCGCCGTCGCGAGTCCCATGAGCC AATTGATCTCATGCACGCGCACATCGGCGGTATGGACGCCTTTGCACGCGGCTTGAAGATTGCAGCTGCCATCCGCGAAG ATGGTCGCCTCGCAAACTTCGTCAAGGACCGCTACAGCAGCTTCGACAGCGACCTCGGAGCCAAGATCGAAGCCGGCAAC TGCAGCTTCGACGAGCTCGAAAAGCTTGCACTGTCTGCTGGTGAACCGTCTTTGGCCAGTGGCCGTCAGGAAATGCTCGA AAACCTGGTTAACGAGTTCCTGTAA Protein sequence : MQYFDCDKIQYEGPSSKNPLAFKHYNPEELVDGKPMKEHLRFAAPYWHVMRNELADPFGGGTAQMPWDDGSNSTENALKR VDVFFEFLEKIGIDYYCWHDRDIAPELSDLSASNAALDAVVAKLKEKQKETGVKLLWGTACLFSHPRYSQGGATSPDMNV FTYAAAQVKKALECTKELDGLGYTFWGGREGYATLLNTDMKRELDHLAAFLHMAVDHAKKIGFDGPFYIEPKPREPSTHQ YDSDSAACLNFLREYGLMDKFRLNIETNHATLAGHTMEHELTVAMNANMLGSIDANRGDELIGWDTDQFPTDIYLTTQVM LCVLEMGGFTTGGLNFDAKRRRESHEPIDLMHAHIGGMDAFARGLKIAAAIREDGRLANFVKDRYSSFDSDLGAKIEAGN CSFDELEKLALSAGEPSLASGRQEMLENLVNEFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-104 | 53 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-104 | 53 |
