Gene Information

Name : Caka_0131 (Caka_0131)
Accession : YP_003547330.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 162675 - 163376 bp
Length : 702 bp
Strand : -
Note : KEGG: ote:Oter_0073 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCAACCATCTGCCGCAGAACCACACGCCCTTCATCTGGAAGGGCTCACCCGCACCTACCAATCCGGCGATACCGACTT
AACCGTACTCGCTGATGTCAACCTCTCGATTGCCATGGGCGAACGGGTTGCCATCGTGGGGCCATCCGGCAGCGGCAAGA
CCACCCTGCTCGGTCTCTGTGCCGGACTCGACAGTCCAAGCTCCGGCACCACCACCTTGCTCGGCACCGATATCACTCAA
CTCAACGAAGACGGTCGCGCCGCATTTCGCGGCGAGCACATCGGCTTCGTATTCCAGAACTTTCAACTGATCCCCAGCCT
GACCGCGCTGGAGAATGTGACCGCTCCTCTGGAACTGCGCGGCGAAACGGACTTCACCGCAAAAGCCGCCGAATTACTCA
AACAAGTTGGACTTGGAGAGCGAATGACGCACTACCCCGTTCAACTCTCCGGGGGCGAGCAACAACGAGTCGCCCTCGCA
CGTGCGTTCATCAACCAGCCAAAGATTCTCTTCGCGGATGAGCCAACCGGCAATCTGGACGGCAAAAACGGCGAACATAT
AGTCGACCTCCTCTTCGGGATGAACCGCGCAGAGGGCACCACCTTGGTGCTGGTCACACACGACCCAGAGTTGGCGAACC
ACTGCGACCGAACCATACGCATTCAAGACGGACGCGTGCAAACCGACACGGCAAGCCGATGA

Protein sequence : 
MQPSAAEPHALHLEGLTRTYQSGDTDLTVLADVNLSIAMGERVAIVGPSGSGKTTLLGLCAGLDSPSSGTTTLLGTDITQ
LNEDGRAAFRGEHIGFVFQNFQLIPSLTALENVTAPLELRGETDFTAKAAELLKQVGLGERMTHYPVQLSGGEQQRVALA
RAFINQPKILFADEPTGNLDGKNGEHIVDLLFGMNRAEGTTLVLVTHDPELANHCDRTIRIQDGRVQTDTASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 45
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caka_0131 YP_003547330.1 ABC transporter NC_008702.1.4606598. Protein 1e-34 48
Caka_0131 YP_003547330.1 ABC transporter NC_012469.1.7686878. Protein 6e-38 47
Caka_0131 YP_003547330.1 ABC transporter CP001581.1.gene798.p Protein 1e-31 42
Caka_0131 YP_003547330.1 ABC transporter NC_012469.1.7685735. Protein 9e-35 42
Caka_0131 YP_003547330.1 ABC transporter CP001581.1.gene598.p Protein 4e-33 41