Gene Information

Name : Caka_1138 (Caka_1138)
Accession : YP_003548329.1
Strain : Coraliomargarita akajimensis DSM 45221
Genome accession: NC_014008
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1432265 - 1433119 bp
Length : 855 bp
Strand : +
Note : TIGRFAM: porphobilinogen deaminase; KEGG: ote:Oter_3477 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence :
ATGTCCATTCTAATCGCCACTCGCAAAAGTCCACTCGCCCTCAAGCAAACCGAAATGGTTCGCGCCTGGCTAGCGGAGAA
ACTACCCAACGACCACTACGAAGAGCTCCAACTCACCACTCAGGTAGACGAACGTCTGAGCTGGTCGCTGGAGAAACGCG
GTGGCATCGGTCTCTTTACTAAAGAACTGGAAGAGGCCCTTCTGGCCAACAAGGCCACACTTGCAGTCCACAGCGCCAAG
GACATGCCAACCACCTTTCAAGACGACCTTTGCATCGCCGGCTACCTTCCGCGTGCCCGCGCCAATGATGTCATCGTCAA
ACGCAGCGAGATTGAAAGCCCCAAACGTATCGCAACCAGCAGTCCGCGCCGCCGTGCGCAGCTAGCACTGCTCAACAATG
ATGCAGAATGGACCACACTACGCGGTAATGTCGGCACCCGCCTGCGTAAGATTGCCGAAGCCCAGGAAGCTGACGCCACC
CTACTCGCAGCGGCAGGACTCAATCGTCTAGACATTCAAAGCTATGACGGTCTCGACTTTATCGAACTGCCCATCGAACA
AATGGTTCCCGCCCCGGGGCAGGCCGCTATTGCAATCCAATGCCGCGAAAAAGACCTTGAGAAGTATCAGGATCTTTTCT
GCGAGGACACTAAACTCGCAGTTACGCTCGAACGCGAGTTCCTCCATCGACTGGGCGGCGGCTGCCAAACACCGGTCGGC
GCCCACTACAACGGCACGGTGTTCTCGATTTACCATCCTCAAATCGGCCACACGACCTACGAGTTTGAAATCGAAAGCAT
CCTCGAGATCGATGGCGTCCTGTCGGCCATTCTCGGCGATTTGGACCTCAAATAA

Protein sequence :
MSILIATRKSPLALKQTEMVRAWLAEKLPNDHYEELQLTTQVDERLSWSLEKRGGIGLFTKELEEALLANKATLAVHSAK
DMPTTFQDDLCIAGYLPRARANDVIVKRSEIESPKRIATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADAT
LLAAAGLNRLDIQSYDGLDFIELPIEQMVPAPGQAAIAIQCREKDLEKYQDLFCEDTKLAVTLEREFLHRLGGGCQTPVG
AHYNGTVFSIYHPQIGHTTYEFEIESILEIDGVLSAILGDLDLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-23 41
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-23 41