Gene Information

Name : tnpR (SJA_P1-00090)
Accession : YP_003546984.1
Strain :
Genome accession: NC_014007
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 9762 - 10370 bp
Length : 609 bp
Strand : +
Note : invertase/recombinase like protein / site-specific recombinase, DNA invertase Pin homolog

DNA sequence :
ATGGCGATTCGGACAAGATCGCAAAATGATGGGAAAACGGACACGATCGGGCAGCATGTGGCGCTGATCGGCTATGCGCG
CGTCTCGACCGCAGACCAGAAGCTGGCGCTCCAGCTCGACGCGTTGAGCGCTGCCGGTTGCGATCGCATATTCGACGATT
ATGCATCTGGAGCAAAAGCCGATCGGCCCGGCCTGGCCGAGGCGCTCACCTATCTGCGTACCGGCGACACGCTGGTGGTC
TGGAAACTCGATCGTCTTGGGCGTTCGATGAGCCACCTGATCGAGAAAGTCGGCGAGCTGGCGGCGCGCGGCGTGGGTTT
CCGCTCGCTCACCGAGCAGATCGATACCACCACGTCAGGCGGGATGCTGGTATTCAACATCTTCGGCTCGCTTGCCCAAT
TCGAGCGCGATCTGATCCGGGAACGCACCCATGCTGGCCTGCGAGCCGCGCGCGAGCGCGGTAGTCAGGGCGGTCGCCGC
CCTGTCGTCACTCCCGACAAGCTGCGCAAGGCGCGGGCGCACATCGCAGCGGGCCTAACTGTTCGTGAGGCGGCGGCTCG
GCTCAAGATCGGGAAAACCGCCCTGTACAAGGCTCTGGAAAGCGCATGA

Protein sequence :
MAIRTRSQNDGKTDTIGQHVALIGYARVSTADQKLALQLDALSAAGCDRIFDDYASGAKADRPGLAEALTYLRTGDTLVV
WKLDRLGRSMSHLIEKVGELAARGVGFRSLTEQIDTTTSGGMLVFNIFGSLAQFERDLIRERTHAGLRAARERGSQGGRR
PVVTPDKLRKARAHIAAGLTVREAAARLKIGKTALYKALESA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
resX ADZ05759.1 invertase/resolvase Not tested AbaR10 Protein 2e-34 62
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 1e-35 62
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 2e-35 62
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 2e-35 62
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 1e-35 62
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 1e-35 62
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 1e-35 62
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 5e-33 56
res AGK07012.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGK07070.1 resolvase Not tested SGI1 Protein 8e-36 54
res AAK02044.1 resolvase Not tested SGI1 Protein 8e-36 54
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 8e-36 54
res AGF34985.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGF35025.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGF35059.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGK06929.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGK06966.1 resolvase Not tested SGI1 Protein 8e-36 54
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 8e-34 53
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 1e-33 53
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 1e-33 53
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 8e-34 48
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 5e-34 47
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 5e-34 47