Gene Information

Name : SJA_C1-08680 (SJA_C1-08680)
Accession : YP_003544314.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Resistance
Product : invertase/recombinase like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 883044 - 883589 bp
Length : 546 bp
Strand : -
Note : site-specific recombinase, DNA invertase Pin homolog

DNA sequence : 
ATGCTCGTTGGATATGCGAGAGTTTCCACCACAGAGCAGAGCCTAACAGTCCAGACTGACGAGCTGGCTGCTCAGCAATG
CGAACGCATCTTTGAGGACAAGGCATCAGGCACCAACACGAACAGACCTGGCCTAATGGACTTGATGGCATTCGTCCGTG
AAGGCGACATGGTGATCGTTTCCAGATTGGATCGTTTCGCCCGCTCATTGGCTGACCTGTTCCAGCTTCTACAGGCGTTG
GCTGATAAGGGCGTTGGCTTCCAATGCGTCCACCAATCGATCGATACGGGCAGCAGCACAGGCAAACTGACACTCGCCAT
ATTGGGTGCAGTGGCTGAGTTCGAGAACGACCTACGACGAGAGCGCCAGAGAGAGGGAATCCAGAAGGCCAAAGCGTCTG
GCATCTACAAGGGCAGGAAAGCTGTCATTGACGCTGACAGGGTGCGACAGCTTGCATCTGAGGGCATGGGGCCGTCTGCT
ATCGCCAAGACGCTTGGATGCCATAGGCAGTCGGTTTATAGGTTGCTGGAATCAAGGGGGGAATGA

Protein sequence : 
MLVGYARVSTTEQSLTVQTDELAAQQCERIFEDKASGTNTNRPGLMDLMAFVREGDMVIVSRLDRFARSLADLFQLLQAL
ADKGVGFQCVHQSIDTGSSTGKLTLAILGAVAEFENDLRRERQREGIQKAKASGIYKGRKAVIDADRVRQLASEGMGPSA
IAKTLGCHRQSVYRLLESRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res YP_005124341.1 DNA-invertase Not tested Not named Protein 2e-16 45
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 6e-21 43
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 6e-21 43
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 6e-21 43
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 1e-20 43
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 4e-16 41
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 9e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SJA_C1-08680 YP_003544314.1 invertase/recombinase like protein GU371926.1.gene95.p0 Protein 9e-21 42