Gene Information

Name : SJA_C1-06110 (SJA_C1-06110)
Accession : YP_003544057.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Unknown
Product : invertase/recombinase like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 626744 - 627286 bp
Length : 543 bp
Strand : -
Note : site-specific recombinase, DNA invertase Pin homolog

DNA sequence :
ATGATCGTCGGCTATGCGCGTGTCAGCACCACGGACCAATGCCTTGCTGTCCAGATGGATGAACTTGCTGCCCACGGCTG
TGACCGCATCTTTCAGGATCAGGCCAGCGGCACCAGCAGGGCACGCGCAGGGCTGGTGGAAATGATGCAGTTTGTCCGCG
AGGGCGACACCATCGTGGTCAGCAGGCTTGACCGCTTCGCTCGCTCGCTGACTGACCTGTTTCAGCTATTAGACGAACTC
AGCCGCAAGGGCGTTGCCTTCCAATGCGTCCATCAGTCCATCGACACCAGTAGCAGCACGGGCAAGCTGACACTCGCGAT
CTTGGGCGCAGTGGCGGAATTCGAGAACGATATCCGTAGGGAACGGCAGCGGGCTGGCATCGCAAAGGCTAAGGCCAATG
GCGTCTATAAAGGGCGCAGGGCTAAGATTAACGCCGAGCGGGTCAGGGAAATGGCCGCTCAAGGCTTTACAGCTAGCACG
ATCGCCAGCGAACTTGGGTGCCACAGGCAATCCGCTTATCGGCTCTTGCGTACCGCGTCCTAA

Protein sequence :
MIVGYARVSTTDQCLAVQMDELAAHGCDRIFQDQASGTSRARAGLVEMMQFVREGDTIVVSRLDRFARSLTDLFQLLDEL
SRKGVAFQCVHQSIDTSSSTGKLTLAILGAVAEFENDIRRERQRAGIAKAKANGVYKGRRAKINAERVREMAAQGFTAST
IASELGCHRQSAYRLLRTAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res YP_005124341.1 DNA-invertase Not tested Not named Protein 1e-20 51
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 3e-25 45
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 3e-25 45
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 4e-25 45
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 4e-25 45
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 3e-25 45
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 3e-25 45
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-30 44
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 1e-30 44
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 1e-30 44