|
Name : tnpA (SJA_C1-04970) Accession : YP_003543943.1 Strain : Genome accession: NC_014006 Putative virulence/resistance : Unknown Product : Tn3-family transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 502199 - 505156 bp Length : 2958 bp Strand : - Note : transposase or inactivated derivative, TnpA family DNA sequence : TTGGCGAGGCGGCGACTGGTGAGCCTGGAAATCTGGGCGGGGCATTATGACGCGCCGCTCGATGAGCGCGAGATTGCACG TCACTATACGCTGACCAGTGACGACCTGGAAATTGTCGGTCGCCGTCGCGGCGATGCCACCCGGCTCGGTTTCGCGATGC TCCTGCTCACCATGAGATGGCCTGGCCGTGCGCTGGAAGCGGGCGAAGTCCCGCCCGCCCCTGTGCTCGGTTATGTGGCC CGCCAACTCGGCGTCGCGCCCGACGCCTTTGCGGACTATGCTCGTCGGGATCAGACCCGCCGCGAGCATCTTGTCGAAAT CCGACGATCGCACGGGTTCAGGATTTTCGATCGCGACGCATTCCGCGAAGTCGTCGCCTTCTCGATCCCTATCGCACAGA CCATCATCCACCCCGGCCAGATGGCAGGCGTCATCGTCGACGAACTCCGGCGTCGGCAGATCCTCCTACCTTCTTCTTCG ATTCTAGAAGCGGTGCTGCGGCGGGCTCGCCAGCAAGCCGAACAGCTTACCTATGAAGTGCTCACAAACGGTCTGCGGCC CGACACCCTTCAGGACCTGGACGATTTGCTGGCCCGACGAACGGGGCAAGCCGCGACATGGCTATCCTGGCTTCGCAATG CGTCACAATCGCCGGCAGCGCGCAACATTCTGCGCCTGATCGAACGGCTCGCCTATGTCCGCGCACTGGGCCTCGATCGC GGGCGGGCTGACATGATTCCGGCTTCGACTTTTGACAGGCTCGCGGACGAGGGCAGCCGCATCACGCCCCAGCATCTTGG CGAACTCAATGCCCTGCGCCGACATGCGACGCTGGCGGCAACCGGCATCCGCCTTGAGGAAGACCTGACCGACGCAACCC TGACGATGTTCGACAAGCTGTTGGGCAGCATGGTGCGCCGCGCCGAAAACCGGACCCGCGACAAAGCCCTCAAGACGGTG CGCGAGCTGCAGGGTCATCTCCGGACGCTCACAGGGTCTTGCCGCATCCTCATCGACGCGCGAACCAACGGCGTGGACTC GCTGGCGCAGATCGAGGCGCTGGACTGGCAGCGCTTCGCCGTGTCGGTCGAGCAAGCCGAAGTGCTCAGCCGACCGGAAA CCGTCGATCGCACCGCTGAATTGATTGAGCGGCATCGCACGGTAAAGCTCTTTGCCGGCGCCTTTCTCAACACCTTCGAA TTTCGCGGTGCCGGTGCGGTGCAGGGACTTCTGTCGGCGCTGGCCATTATCGCGGAGCTATACCGGACCGGCAAACGGCG CTTGCCTGATCGCGTGCCGCTGCGCTTTGTGCCGTCCGCATGGCGGCCGTTCATCCTGCGCGATGGCATCGTCGACCGCG CCGCCTATGAACTATGCGCTCTGTCGCAGCTACGTGAGCGGCTGCGAGCGGGAGACATATGGGTCGCGGGCAGCCGCCAG TTTCGCGATTTCGACAGCTACCTCATCCCACCGGCCACCTATGCGGCGCTTCGCGAGAAGGGACCACTGCCGCTCGCCAT CGAAACGGATTTCGAGCGCCATATTGAGGAAAGGCGCACCAGGCTCGACACGGCCATCGAACAGGTAACGGTCCTCGCGC GACAAGGCGAGCTGCCCCAGGTCAGGCTTGACGAAAACGGCCTCATCATCTCGCCGCTGAAGGCGGCAACGCCGCCCGCT ACCGAAATTGCCCGTCGCGCAGCCTATGATCGCCTGCCACGGGTGAAGATCACCGACCTGCTGCTTGAGGTCGATGCTTG GACCGGGTTCAGCGAATGCTTCATCCACCGACGTTCGGGCCGGGAGGCCGACGATCGCAATGCGCTTCTCACCGTCATCC TCGCCGATGGCATCAATCTCGGCCTCACGCGCATGGCGGAAACCTGCCGGGGCGCAAGTCTGCGCCAGCTTGCTCACTTG CATGACTGGCACATCAGCGAGGCCGCCTATGGCGAGGCGCTGGGAAGGCTGATCAACGCCCATCGCACCATGCCGCTCGC CGCGCTGTGGGGAGACGGCACCACCTCGTCGAGCGACGGACAGCAGTTTCATGCCGGCGGTCGTGGGGCCGCGATCGGTG ACATCAACGCGCGCAGCGGCAACGAACCGGGCGTCGCCTTCTACACCCATGTCTCGGATCGATATGATCCCTTTGCGAGC CGGGTGATCGCGGCGACCGCAGGCGAAGCGCCCTATGTCCTGGATGGCTTGCTGTATCACCAGACCGGCATGACGATCGA GGAGCACTACACCGATACGGGTGGAGCATCGGACCATGTGTTCGGTCTCATGCCCTTCTTCGGCTACCGCTTCGCGCCGC GCTTGCGCGACATTAAGGAGCGTCGTTTGCACCTCCTTCCCGGCCAGGAATCCGGCCCCTTGCTCGCCGGCATGACGACC GAACCGATCGCATTGGGCCATGTCGCGGCGCATTGGGACGAACTGCTACGGTTCGCCACGTCGATCCGCACCGGCACCGT CACTGCTTCGGCGATGCTGCGCCGGCTATCCGGCTATCCGCGACAGAACGGACTGGCCCTCGCGCTGCGCGAGCTTGGCC GCCTCGAACGCTCGATCTTCATGCTCGACTGGCTGCGCGACATCGACCTGCGCCGGCGCACCCAGGCGGGCCTCAACAAG GGCGAAGCCCGCAACGCGCTCGCCCGCGCGCTCTTCTTTAACCAGCTCGGCGAATTGCGTGATCGGCGGTTCGAAAACCA GACTTATCGCGCCTCCGGCCTCAACCTGCTCGTCGCCGCCATCATCCTGTGGAACACTCGCTATCTCGAAATGGCGCTGG CTGACATCGGCACGCCCGACGAGATCGCGCGCCACGTCGCGCCATTGGGCTGGGAGCATATCTCGCTGACGGGGGACTAT AGCTGGAATGTCGAAGATCGGCCCGATCCGGATGCCTTGCGGCCGCTGCGCGCCGTCAGCTCCCTGCTCGCCGCGTGA Protein sequence : MARRRLVSLEIWAGHYDAPLDEREIARHYTLTSDDLEIVGRRRGDATRLGFAMLLLTMRWPGRALEAGEVPPAPVLGYVA RQLGVAPDAFADYARRDQTRREHLVEIRRSHGFRIFDRDAFREVVAFSIPIAQTIIHPGQMAGVIVDELRRRQILLPSSS ILEAVLRRARQQAEQLTYEVLTNGLRPDTLQDLDDLLARRTGQAATWLSWLRNASQSPAARNILRLIERLAYVRALGLDR GRADMIPASTFDRLADEGSRITPQHLGELNALRRHATLAATGIRLEEDLTDATLTMFDKLLGSMVRRAENRTRDKALKTV RELQGHLRTLTGSCRILIDARTNGVDSLAQIEALDWQRFAVSVEQAEVLSRPETVDRTAELIERHRTVKLFAGAFLNTFE FRGAGAVQGLLSALAIIAELYRTGKRRLPDRVPLRFVPSAWRPFILRDGIVDRAAYELCALSQLRERLRAGDIWVAGSRQ FRDFDSYLIPPATYAALREKGPLPLAIETDFERHIEERRTRLDTAIEQVTVLARQGELPQVRLDENGLIISPLKAATPPA TEIARRAAYDRLPRVKITDLLLEVDAWTGFSECFIHRRSGREADDRNALLTVILADGINLGLTRMAETCRGASLRQLAHL HDWHISEAAYGEALGRLINAHRTMPLAALWGDGTTSSSDGQQFHAGGRGAAIGDINARSGNEPGVAFYTHVSDRYDPFAS RVIAATAGEAPYVLDGLLYHQTGMTIEEHYTDTGGASDHVFGLMPFFGYRFAPRLRDIKERRLHLLPGQESGPLLAGMTT EPIALGHVAAHWDELLRFATSIRTGTVTASAMLRRLSGYPRQNGLALALRELGRLERSIFMLDWLRDIDLRRRTQAGLNK GEARNALARALFFNQLGELRDRRFENQTYRASGLNLLVAAIILWNTRYLEMALADIGTPDEIARHVAPLGWEHISLTGDY SWNVEDRPDPDALRPLRAVSSLLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 45 |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 45 |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 44 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 43 |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpA | YP_003543943.1 | Tn3-family transposase | VFG1031 | Protein | 0.0 | 43 |
