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Name : SJA_C1-03340 (SJA_C1-03340) Accession : YP_003543780.1 Strain : Genome accession: NC_014006 Putative virulence/resistance : Unknown Product : putative integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 348591 - 349787 bp Length : 1197 bp Strand : + Note : - DNA sequence : ATGGCACTTTCATCCCTTGCACTGAGCAAAGCAAAGCCCCGTGAAAAGCCCTACAAGCTCGCAGACGGGCACGGCCTCTA CCTTCTGATTACCCCTGGAGGCGGTCGTTACTGGCGTATGAATTACCGGTTCGGCGGCAAAGCCAAGACGATGGCGATGG GGGTGTTCCCATTGATTACCCTGGCGGAAGCGCGAGAGAAACGAGATGCGGCCCGCAAGCTACTCGCGGCCGGATCGGAC CCGACGGCAACACGCAAGGAAGCTGAGGCACGCGAAGCTTTCGAAGCGACCACTGGCTTTCGGACCGTCGCCGAAGAGTG GCTGGCGAAACGAGAACGCGAAGGGCTTGGGGCCGTCACCCTTGGCAAAGTGAAGTGGTTGCTTGAGTTTGCTTATCCCT CCTTGGGCAACCGAAAGATCAGCGAGATCACAAGCATGGAGCTGCTGGCAGTTCTGCGTCAGGTCGAAGGTCGCGGTCGA CACGAGACTGCTAGGCGGTTGAGAAGTGTGTGCGGCAGGGTCTTTCGTTATGCGATCGCCACCGGACGGGCAGAACATGA TCTATCGGCCAATCTGCGCGACGCCCTGACCACGCCCAAGGTGAAGCATCTGGCTGCAATCACCAACAGTCAGCAGGTCG GCCCACTCATGCGGGCAATCGAAACCTTTGATGGCCATGCGGTTACACGGGCAGCTCTGCGACTTGCGCCTCATGTTTTC GTCCGCCCCGGCGAGCTACGTCATGCCGAATGGGCCGAGATCGATTTCGACAAGGCGTTGTGGTGCATCCCAGCGGAAAA GATGAAAATGCGCCGCCCCCATCGCGTACCGCTATCGAGGCAGTCGCTGGCGATCTTTGCTTCCATTCGAGAGATCACCG GGACAGGTAAGTTTGTCTTTCCCGGCTTCCAGTCCTTGAAGCGTCCTATGTCCGAGAACGCTTTGAACGGAGCGCTTCGT AGACTCGGCTATTCAGGCGACGAGATGACGAGTCACGGCTTTCGAGCCATGGCGAGCACCTTGCTCAATGAAATGGGAAG ATGGCATCCAGACGCTATTGAGCGCCAATTAGCACATGCTGAAGCTGACGCGGTTCGGCGCGCCTATGCCCGAGGAGAAT ATTGGGACGAACGTGTAGCGATGATGCAGGCATGGTCGGACTATCTCGATGACCTAGCCGGTAAGCCACCTACTTGA Protein sequence : MALSSLALSKAKPREKPYKLADGHGLYLLITPGGGRYWRMNYRFGGKAKTMAMGVFPLITLAEAREKRDAARKLLAAGSD PTATRKEAEAREAFEATTGFRTVAEEWLAKREREGLGAVTLGKVKWLLEFAYPSLGNRKISEITSMELLAVLRQVEGRGR HETARRLRSVCGRVFRYAIATGRAEHDLSANLRDALTTPKVKHLAAITNSQQVGPLMRAIETFDGHAVTRAALRLAPHVF VRPGELRHAEWAEIDFDKALWCIPAEKMKMRRPHRVPLSRQSLAIFASIREITGTGKFVFPGFQSLKRPMSENALNGALR RLGYSGDEMTSHGFRAMASTLLNEMGRWHPDAIERQLAHAEADAVRRAYARGEYWDERVAMMQAWSDYLDDLAGKPPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-65 | 42 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-65 | 42 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 3e-65 | 42 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 4e-65 | 42 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 4e-65 | 42 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 3e-65 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 3e-65 | 42 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 9e-62 | 41 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 1e-67 | 41 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 1e-63 | 41 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 1e-63 | 41 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 8e-64 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SJA_C1-03340 | YP_003543780.1 | putative integrase | VFG0783 | Protein | 2e-65 | 42 |
| SJA_C1-03340 | YP_003543780.1 | putative integrase | VFG0598 | Protein | 5e-64 | 41 |
