Gene Information

Name : cpxB (SJA_C1-30180)
Accession : YP_003546464.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 3006158 - 3006958 bp
Length : 801 bp
Strand : +
Note : ABC-type polysaccharide/polyol phosphate export system, permease component

DNA sequence : 
GTGACGACCTTTTCGCAACTCACCGCGATCCGCCGCAGCGCCGAGATCCAGGGCCGGGTGATCTATGCGCTTTTGATGCG
CGAGATTCTCACCCGCTATGGTCGGCACAATATCGGCTTCCTCTGGTTGTTCGTCGAACCCATGTTGTTCACGACAGGCG
TTACCATCCTGTGGACGCTATCCAAATCAGTCCATGGCTCGTCGCTACCCATTGTTGCCTTCGCGCTTACCGGTTATTCT
AGCGTTCTTTTGTGGCGTAACATGCCAGCGCGCTGCATCGGGGCGATCGAGCCGAATCTTGCTCTCATGTATCATCGCAA
TGTTAAGGCGATCGATATCTTCATTGCCCGCCTTTTGCTTGAGGCTGGCGGGGCCACGATCTCATTTATCACCCTAAGCT
TGTTCTACATCTACATCGGATGGCTCGATCCCCCCGAAGACGTTCTCACGGTTGTGGGAGGGTGGCTGCTACTTGCATGG
TTTGGAGCCAGCCTAGCTATGTTTCTGGGAGCCATCAGCGAGAAGAGCGAGCTTGTTGAGCGATTCTGGCATCCGGTTTC
CTACATCATGTTCCCCCTTTCAGGCGCGGCATTCATGGTTGATGCTCTCCCAACGGGCGCTCAGAAGTTTATGCTCTATG
TCCCGATGGTGAATGGTGTGGAAATCGTCCGCAAAGGATATTTCGGAAACAATGTCCATTCCCATTATGACGTGCCCTAC
ATAATGGGGTGGTGCATCGGGCTGACCCTGCTCGCGCTCGCGCAGGTAGCCATGATCGGTCGGGGAATTACACCAGAGTG
A

Protein sequence : 
MTTFSQLTAIRRSAEIQGRVIYALLMREILTRYGRHNIGFLWLFVEPMLFTTGVTILWTLSKSVHGSSLPIVAFALTGYS
SVLLWRNMPARCIGAIEPNLALMYHRNVKAIDIFIARLLLEAGGATISFITLSLFYIYIGWLDPPEDVLTVVGGWLLLAW
FGASLAMFLGAISEKSELVERFWHPVSYIMFPLSGAAFMVDALPTGAQKFMLYVPMVNGVEIVRKGYFGNNVHSHYDVPY
IMGWCIGLTLLALAQVAMIGRGITPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 8e-50 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxB YP_003546464.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 7e-77 62
cpxB YP_003546464.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 4e-50 44
cpxB YP_003546464.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 3e-49 41
cpxB YP_003546464.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 3e-49 41