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Name : wcbC (SJA_C1-30150) Accession : YP_003546461.1 Strain : Genome accession: NC_014006 Putative virulence/resistance : Virulence Product : polysaccharide export outer membrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 3003484 - 3004701 bp Length : 1218 bp Strand : - Note : periplasmic protein involved in polysaccharide export DNA sequence : GTGTCTGTAATAGTTGGATCTGGCTTGCCCTCGATGAACAAAACAATGATGTCAGTACGAATGGTGGGGGCGACATGCCT TGCTATGGCGCTTTCTGGTTGCGCCATCATGTCATCATCGGGTCCGTCCGCCCGCGCCGTCAGGGCCGAGCGCGATCACA TGGTCGATGACGCCCAGATCAAGGTCATAGACGTTACGGATGCGGTAGCCCGCGACATTATCGCGAACACCCCTCATTCC TCCTTTGTCGAAGATCTGGGGGAGGGCAGGCCGATCGGATCGGTGATCGGCCAGGGCGATGTACTGGATATCGCGATTTG GGAAGCGCCGCCGGCAACGCTGTTCGGCAGTTCCGGCAGTGATTTGCGGCTAGGATCGGTCAGCTCCGGTTCGCTCTCGC GCGGCACGCCGCTGCCGGAGCAGATGGTCGACAGCGACGGCCAGATCACCATTCCGTTCGTCGGCCGCGTTCAGGCGGCG GGGCGCACGCCGCAGCAGATCGCACAGACCATCACGTCCCGCCTTGTCGGCAAGGCGCACCAGCCCCAGGCGATTGTGCG CCTGTCGCGCAACGCCGCCGCGAACGTCACCGTCGTGGGAGAGGTCGCCAACAGCGCGCGCGTGCCGCTGACATCGCGGG GCGAGCGCATTCTAGATGTTTTGGCGACTGCGGGCGGGGTGCGTCAGCCGGTCGGCAAGATGACGGTCCAGATCACGCGC GGGATGAAGGTGTCCGCGCTCCCGCTGGAGACGGTGATCCGCGATCCCCGCCAGAATGTCCGGCTTGAACCCGACGATGT CATGACCCTGCTGTATCAGCCCTACAGCTTCACCGCTCTGGGCGCGATCGGCAAGAATGACGAGGTGAATTTCGAGGCGA CCGGACTGACGCTGGCGCAGGCGCTGGGCCGCATCGCCGGCTTGCAGGATGCCCGCGCCAACTTGAAGGGTGTGTTTATC TTCCGGTTCGAGGATCCGGCCGCGCTCGACCCGGCGATCCGGACGGCCGCCCGTACCACCCCGGACGGCAAGGTGCCGGT CATCTACCGCATCAACATGAAGGAACCTTCCAGCCTTTTTATCGCGCAAAGCTTTCCGATCCGGAACAAGGACGTTCTCT ACGTGTCCAACGCGCCTTTGGCGGACATTCAGAAGTTTGTGAGCGTGATCTACTCGACCTTTCTGCCGGTGGCGACGACG GCGACGACGTTGAGATAA Protein sequence : MSVIVGSGLPSMNKTMMSVRMVGATCLAMALSGCAIMSSSGPSARAVRAERDHMVDDAQIKVIDVTDAVARDIIANTPHS SFVEDLGEGRPIGSVIGQGDVLDIAIWEAPPATLFGSSGSDLRLGSVSSGSLSRGTPLPEQMVDSDGQITIPFVGRVQAA GRTPQQIAQTITSRLVGKAHQPQAIVRLSRNAAANVTVVGEVANSARVPLTSRGERILDVLATAGGVRQPVGKMTVQITR GMKVSALPLETVIRDPRQNVRLEPDDVMTLLYQPYSFTALGAIGKNDEVNFEATGLTLAQALGRIAGLQDARANLKGVFI FRFEDPAALDPAIRTAARTTPDGKVPVIYRINMKEPSSLFIAQSFPIRNKDVLYVSNAPLADIQKFVSVIYSTFLPVATT ATTLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 6e-72 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wcbC | YP_003546461.1 | polysaccharide export outer membrane protein | VFG2566 | Protein | 3e-98 | 53 |
| wcbC | YP_003546461.1 | polysaccharide export outer membrane protein | VFG0255 | Protein | 3e-72 | 43 |
| wcbC | YP_003546461.1 | polysaccharide export outer membrane protein | VFG0699 | Protein | 1e-72 | 41 |
| wcbC | YP_003546461.1 | polysaccharide export outer membrane protein | VFG0687 | Protein | 1e-72 | 41 |
