Gene Information

Name : phoB (SJA_C1-28910)
Accession : YP_003546337.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Virulence
Product : two-component system phosphate regulon response regulator PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2890295 - 2890996 bp
Length : 702 bp
Strand : +
Note : OmpR family / response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGGCGCGGGCCAGGATGCTGCTGGTGGAGGATGACGCGGCGCTGGCCGAACTGCTCATCTGGCACTTCAAGCGCGAGGA
TTTCGAGGTCGTCCATACGGTGGACGGCGAGGAAGCGCTGCTTCTGGCGCAGGAAAACATGCCCGACATCGTGCTGCTCG
ACTGGATGGTGGAAAGCCTGTCGGGCATAGAGGTCTGCCGCCGCCTGCGCCGCATGAACGGCACGGCCAACGTGCCGATC
ATCATGCTGACCGCGAGGGGCGAGGAGGAGGATCGCGTGCGCGGGCTCGAAACGGGCGCGGACGATTATGTGACCAAGCC
CTTCTCGCCCCGCGAACTGGTGGCGCGCGTCGGCGCGGTGCTGCGGCGCGTGCGCCCGGCGCTGGCGGGCGAGACGCTGA
CCTTCGCGGATGTGGAGATGGACACGGTGGGGCACAAGGTCCGTCGCGGCGGCCAGGTGATCCCGCTCGGCCCCACGGAA
TTCCGCCTGCTCAAGCATTTCCTGGAGCATCCCGGCTGGGTCTTCTCCCGCGAGCGGCTGCTGGACAGCGTATGGGGGCA
GGACAGCGACATCGAACTGCGCACGGTGGACGTGCATATCCGCCGCCTGCGCAAGGCGATCAACGCGGACGGCCGCCATC
GCGACATCATCCGCACGGTGCGCTCGGCCGGCTATGCGCTGGATACCGACGGAGCGGCGTGA

Protein sequence : 
MARARMLLVEDDAALAELLIWHFKREDFEVVHTVDGEEALLLAQENMPDIVLLDWMVESLSGIEVCRRLRRMNGTANVPI
IMLTARGEEEDRVRGLETGADDYVTKPFSPRELVARVGAVLRRVRPALAGETLTFADVEMDTVGHKVRRGGQVIPLGPTE
FRLLKHFLEHPGWVFSRERLLDSVWGQDSDIELRTVDVHIRRLRKAINADGRHRDIIRTVRSAGYALDTDGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 2e-21 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 2e-21 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 2e-21 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB AE000516.2.gene3505. Protein 4e-34 47
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB NC_010400.5986590.p0 Protein 9e-26 42
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB NC_010410.6002989.p0 Protein 8e-26 42
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB NC_011595.7057856.p0 Protein 8e-26 42
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB NC_008702.1.4607594. Protein 8e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB VFG1389 Protein 2e-24 43
phoB YP_003546337.1 two-component system phosphate regulon response regulator PhoB VFG1390 Protein 3e-28 42