Gene Information

Name : pdhD (SJA_C1-24290)
Accession : YP_003545875.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : 1.8.1.4
Position : 2446912 - 2448312 bp
Length : 1401 bp
Strand : -
Note : pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, or related enzyme

DNA sequence :
ATGGCAGACTTCGATTATGACGTTCTGGTGATCGGCGCCGGTCCGGGCGGCTATGTCGCGGCGATCCGCGCCGCGCAGCT
TGGCCTCAAGACCGCCTGCGCCGAAAGCCGGGAGACGCTGGGCGGCACCTGCCTCAATGTCGGCTGCATCCCGTCCAAGG
CGCTGCTGCACGCCTCGGAACTCTATGAGGAGGCCGCGAACGGCGCGCTCGCCAAGCTGGGCGTGAAGATCGACAAGATG
AGCCTGGACCTCGACACCATGCAGGGCCAGCGCAAGGATGCGGTGAAGGGCCTGACCGGCGGCGTCGAATTCCTGTTCAA
GAAGAACAAGGTCGACTGGCTGAAGGGGCTGGCGAGCTTCACCGGCGCCAACACCGTGCAGGTCGCGGGCAAGACCGTCA
CCGCGAAGAATATTGTCATCGCCACCGGATCGTCGGTGACGCCCCTTCCGGGTGTGCAGGTCGACAATGAAGGCGGCAGG
ATCGTCGATTCGACCGGCGCGCTGGAACTGGACAAGGTGCCGGGCCATCTGGTCGTGGTCGGCGGCGGCGTCATCGGCCT
GGAACTGGGCTCGGTATGGCGGCGCGTCGGCGCCAAGGTCACGGTGGTCGAATATCTCGACCAGATCCTGCCCGGCATGG
ACGGCGAAGTCCGCAAGGAAGCGAACAAGATCTTCAAGAAGCAGGGTTTCGAGTACAAGCTCGGCACCAAGGTCACGGGC
GCGGAAGTCGGCAAGAAGGGCGTGACCCTGACCGTCGAACCCGCCGCCGGGGGCGCGGCAGAGAAGATCGAGGCCGATGT
CGTGCTGGTGTCCATCGGCCGCCGTCCGAACACCGAAGGGCTGGGTCTCGACAAGATCGGCCTGGAACTCAACGCCCGCG
GCCAGATCGAGACCGATCATGACTTCGCGACCAAGGTTCCGGGCGTCTGGGCCATCGGCGACGTCATCCCCGGCCCGATG
CTGGCGCACAAGGCCGAGGACGAAGGCATCGCCGTGGCCGAGAATATCGCGGGCCTGACCGGCATCGTGAACCATGACGT
GATCCCGTCGGTGGTCTATACCAAGCCGGAAATCGCGGGCGTCGGCCTGACCGAAGAGGCCGCCAAGGAGAAGGGCGCGA
TCAAGGTCGGCAAATTCCCGATGCTGGCGAACAGCCGCGCCAAGACCAATCATGAGCCGGACGGCTTCGTGAAGATCATC
GCCGATGCCGAAACCGACAAGGTGCTGGGCGTCTGGATCATCGCCACGGTCGCGGGCACGATGATCGCCCAGGCGGCGCA
GGCGATGGAGTTCGGCGCATCGAGCGAGGACATTGCCTATACCTGCCATGCCCATCCGACGCACAGCGAGGCGATCAAGG
AAGCGGCCATGGCCGTGACGGGCAAGCCCATCCATATGTGA

Protein sequence :
MADFDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASELYEEAANGALAKLGVKIDKM
SLDLDTMQGQRKDAVKGLTGGVEFLFKKNKVDWLKGLASFTGANTVQVAGKTVTAKNIVIATGSSVTPLPGVQVDNEGGR
IVDSTGALELDKVPGHLVVVGGGVIGLELGSVWRRVGAKVTVVEYLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTG
AEVGKKGVTLTVEPAAGGAAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDHDFATKVPGVWAIGDVIPGPM
LAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAGVGLTEEAAKEKGAIKVGKFPMLANSRAKTNHEPDGFVKII
ADAETDKVLGVWIIATVAGTMIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 2e-53 42