Gene Information

Name : phoP (SJA_C1-23110)
Accession : YP_003545757.1
Strain :
Genome accession: NC_014006
Putative virulence/resistance : Virulence
Product : OmpR-family two-component system response regulator PhoP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2327071 - 2327736 bp
Length : 666 bp
Strand : +
Note : response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGCGTCTGCTGATCGTCGAAGATGAACCGAGCCTTGGGCAACAGCTCCGCAACACGCTGGAGGGCGCGGGCTATGCCGT
GGACCTGGCCGATGATGGCGAGGACGGGCATTTCCTGGGCGCGACCGAAAGCTATGACGCGGTGGTGCTGGACCTGGGCC
TGCCGACCATCGACGGGCTGACCGTGCTGGACCGCTGGCGCAAGGAAGGCCGGGGCTTTCCCGTGCTGGTGCTGACGGCG
CGGGATAGCTGGTCGGACAAGGTGGCCGGGCTGGACGCGGGCGCGGACGATTATCTGGCCAAGCCGTTCCAGAGCGAGGA
ACTGATCGCCCGGCTGCGCGCCCTGATCCGCCGCGCTTCGGGCAATGCGTCGAGCGAACTGACGGCGGGCGACGTGCGGC
TGGACACGCGGTCGGGCAAGGTGACGCTGAAGGGCGAGCCGGTGAAGCTGACCGCGCAGGAATATAAGCTGCTGTCCTAC
CTGCTGCATCACAAGGGCAAGGTGGTGAGCCGAACCGAACTGATCGAACATATTTACGATCAGGATTTCGACCGCGATTC
CAACACCATCGAAGTGTTCGTCACCCGCATCCGCAAGAAGCTGGGCGCGGACGTCATCACGACGATCCGGGGCCTGGGCT
ACAGCCTGGATGAACCGGGGCGGTAA

Protein sequence :
MRLLIVEDEPSLGQQLRNTLEGAGYAVDLADDGEDGHFLGATESYDAVVLDLGLPTIDGLTVLDRWRKEGRGFPVLVLTA
RDSWSDKVAGLDAGADDYLAKPFQSEELIARLRALIRRASGNASSELTAGDVRLDTRSGKVTLKGEPVKLTAQEYKLLSY
LLHHKGKVVSRTELIEHIYDQDFDRDSNTIEVFVTRIRKKLGADVITTIRGLGYSLDEPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0487 Protein 5e-25 47
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP NC_002516.2.879194.p Protein 9e-33 46
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP CP004022.1.gene1005. Protein 9e-32 44
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP NC_002695.1.913289.p Protein 2e-31 44
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP CP000034.1.gene2022. Protein 2e-31 44
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0530 Protein 3e-32 44
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP CP000647.1.gene1136. Protein 4e-32 43
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP CP001918.1.gene2526. Protein 7e-31 43
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP CP001138.1.gene1939. Protein 1e-31 43
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0197 Protein 4e-26 43
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0111 Protein 2e-27 42
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0308 Protein 1e-21 42
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0347 Protein 3e-22 41
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP BAC0083 Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP VFG0473 Protein 2e-22 44
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP VFG1390 Protein 7e-22 43
phoP YP_003545757.1 OmpR-family two-component system response regulator PhoP VFG0475 Protein 1e-31 43