Gene Information

Name : Mmah_0828 (Mmah_0828)
Accession : YP_003541996.1
Strain : Methanohalophilus mahii DSM 5219
Genome accession: NC_014002
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 847282 - 847989 bp
Length : 708 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: swd:Swoo_1899 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: Q12Y10 ABC transporter ATPase; PFAM: ABC transport

DNA sequence :
ATGCAGCAACCCCCAAGAGAAAACAAAACATCATGCAACCCTGCTATTGAAACTATAGGCCTGCTCAAAAGTTACAGGCT
CGCTGATCAGGAAATCCCGATATTGCATGGAATTGATCTCACAATAAACCGCGGAGAATTCGTGGCAATAATGGGGCCTT
CAGGTTCCGGAAAAAGTACACTTATGAATATGCTTGGCTGCCTTGACAGGCCCACGATGGGAGAGGTAAGGACTAGCAAT
CGTAACATAAGTGAACTTTCTGATAGTGAAATCGCAAAATTACGAGGACTGGAAATCGGTTTTGTCTTCCAGAATTTCAA
TCTTATTTCCCGTATGAATGCTCTTGAAAATGTCCTGCTTCCAACCTACGAGAACAGCAAGGATAACGTGGATCCGGAAA
AAAGAGGCATTGAACTCCTTGAACTTGTAGGACTGGGAAACCGGATGGGTCACAAACCTTCCGAAATGTCAGGAGGCCAA
TGCCAGAGGGTTGCCATAGCACGTTCACTTATCAATAATCCATCGATAATTCTTGCCGATGAACCCACAGGTAACCTGGA
TTCTAAAACCAGTCTGGAAATAATGAACCTCTTCTCAAAACTGCATCGGCAGGGAAGTACAGTAATAATGATAACACACG
ATCCACAGACCGCTGAGTATGCAAGCCGAACCATACACCTGAAAGATGGATACATAGAAAACAACTGA

Protein sequence :
MQQPPRENKTSCNPAIETIGLLKSYRLADQEIPILHGIDLTINRGEFVAIMGPSGSGKSTLMNMLGCLDRPTMGEVRTSN
RNISELSDSEIAKLRGLEIGFVFQNFNLISRMNALENVLLPTYENSKDNVDPEKRGIELLELVGLGNRMGHKPSEMSGGQ
CQRVAIARSLINNPSIILADEPTGNLDSKTSLEIMNLFSKLHRQGSTVIMITHDPQTAEYASRTIHLKDGYIENN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmah_0828 YP_003541996.1 ABC transporter NC_012469.1.7686878. Protein 8e-51 54
Mmah_0828 YP_003541996.1 ABC transporter CP001581.1.gene798.p Protein 2e-37 46
Mmah_0828 YP_003541996.1 ABC transporter NC_008702.1.4606598. Protein 1e-37 46
Mmah_0828 YP_003541996.1 ABC transporter CP001581.1.gene598.p Protein 3e-38 42
Mmah_0828 YP_003541996.1 ABC transporter NC_012469.1.7685735. Protein 1e-34 41