Gene Information

Name : Mmah_0215 (Mmah_0215)
Accession : YP_003541393.1
Strain : Methanohalophilus mahii DSM 5219
Genome accession: NC_014002
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 242124 - 242318 bp
Length : 195 bp
Strand : +
Note : COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: shl:Shal_4180 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q12Z31 XRE family transcriptional regulator

DNA sequence :
ATGAAAAATACCCTGAAAGTCTGGAGAGCAAAGAAAGATATTACTCAGGAAGAGCTGGCCCGGGAAATGGAGGTTACAAG
GCAAACCATCAACGCTATAGAACGTGGCAAATACGATCCGAGTATCAAGCTGGCATTCAGGATGGCTAAATTCTTCGAAT
GTTCAATAGAGGATATTTTCATCTATGAGGAATAA

Protein sequence :
MKNTLKVWRAKKDITQEELAREMEVTRQTINAIERGKYDPSIKLAFRMAKFFECSIEDIFIYEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 7e-10 54
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 5e-10 54
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-12 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmah_0215 YP_003541393.1 XRE family transcriptional regulator VFG2168 Protein 2e-10 54
Mmah_0215 YP_003541393.1 XRE family transcriptional regulator VFG2175 Protein 2e-10 54