Gene Information

Name : Mmah_1716 (Mmah_1716)
Accession : YP_003542856.1
Strain : Methanohalophilus mahii DSM 5219
Genome accession: NC_014002
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1702779 - 1703465 bp
Length : 687 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: Q12ZM4 ABC tr

DNA sequence :
GTGCGGGCTGAAAATGTTTGCCGGGATTATGAAGTGGGGGATATGACAATCAAGGTACTCAGGAATGTGGACCTGCTTGT
CAGGAAGGGGGAGTTTGTAGCTATCATGGGTCCCTCGGGGTCGGGTAAAAGTACCCTGATGAATATGATAGGATGTCTGG
ACAGGCCTACCTGTGGTGCAGTTTATATCATGGGGAAGAATGTGAACCGTATCTCCGATAATGAACTTGCAAAGTTAAGA
GGGATGGAGATAGGTTTTGTGTTCCAGAGTTTCAATCTGGTTTCACGATTAAGTGCCCTGGAAAATGTGGAATTGCCTAC
CTATGCTAACAGACGGCCCGGGGTTGATGTAAGAGGTAAGGCCAAGAAATTACTGGATCAGGTAGGACTTTCAGAACGTA
TGGATTACAAACCCACCGAGTTGTCTGGGGGTCAGTCCCAGAGGGTGGCAATAGCCAGGGCGCTTGTAAACGACCCTTCT
ATAATACTTGCCGATGAACCCACCGGGAACCTGGATTCAAAAACAGGGGAAGAGATAATGAATATTTTTACAGATCTTCA
TCGAAGGGGTCGCACGGTCATTATGATTACTCATGACTTACATCTTGCTAATAAATACGCAGACCGGGTAGTTTACCTGA
AAGACGGTGTAATTGATGACAGGACTACCAAGGTCAACGCTGCTTAA

Protein sequence :
MRAENVCRDYEVGDMTIKVLRNVDLLVRKGEFVAIMGPSGSGKSTLMNMIGCLDRPTCGAVYIMGKNVNRISDNELAKLR
GMEIGFVFQSFNLVSRLSALENVELPTYANRRPGVDVRGKAKKLLDQVGLSERMDYKPTELSGGQSQRVAIARALVNDPS
IILADEPTGNLDSKTGEEIMNIFTDLHRRGRTVIMITHDLHLANKYADRVVYLKDGVIDDRTTKVNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-28 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmah_1716 YP_003542856.1 ABC transporter NC_012469.1.7686878. Protein 4e-53 56
Mmah_1716 YP_003542856.1 ABC transporter NC_008702.1.4606598. Protein 7e-37 46
Mmah_1716 YP_003542856.1 ABC transporter CP001581.1.gene598.p Protein 5e-36 44
Mmah_1716 YP_003542856.1 ABC transporter CP001581.1.gene798.p Protein 9e-41 43
Mmah_1716 YP_003542856.1 ABC transporter NC_012469.1.7685735. Protein 4e-34 43