|
Name : EAM_0719 (EAM_0719) Accession : YP_003537809.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : type II secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 807300 - 808505 bp Length : 1206 bp Strand : - Note : - DNA sequence : ATGCGTTTCCGCTATCAGGCGCTCAATCAGCGTGGCGTCAAAGTTCAGGGCGAAACCGAAGCCGATACGCCACAGCAGGC ACGCCAGCTGCTGCGCGAACAGCAGCTACAGCCATTGCGCTTACAGCCGGTAAAACCGGGCGTACTGCGTTCTGGATCGT CGTCACGCCGTTCGCTGTCTGCCAGCGAGCGGGTATTGATGACGCGCCAGCTGGCAACGCTGGTTGGCGCGGCGTTGCCG TTGGAACAGGCGCTGCTGGCGCTGGAAAAGCAGACTACCAAACCAGCGGGGCGCACCATGCTGCATGCCATCCGCCAGAA GGTGCTGGAAGGTGCTTCACTGGCGGATGCCGTTGGCCTTTATCCTGCCACGTTCCCTCCGCTCTATCAGGCGATGATCG CCGCCGGAGAAGCATCGGGCAAACTGGATAACGTGCTGGAGCAATTAGCTGATTACAGCGAAAAGACGCAGCAGATCAAA GGTAAGCTTACCCAGTCAATGATCTACCCCCTGCTGCTGACGCTGGTGGCCATCAGCGTGATCACCATTTTGCTGACCGC CGTGGTGCCCAGCGTGGTCGAACAGTTCGTACACATGAAACAGGCTTTACCGCTGTCTACCCGCCTGCTGATGAGCATCA GCGAAATAACGCGCGCCATCGGCCTGCCGGTGCTGCTGGTTATTCTGCTGGCGGGTTTCTGCGCCCGCATCATACTGCGC CGCCCGGCACAGCAGTTACGCTGGCACCAGGCCAAGCTGCGGCTGCCGCTCATTGGCCGTATCGTCCTTAATCTCAACCT GGCACGCTATGCGCGCACCCTGAGCATCCTGACCAACAGCGCCGTACCGCTGCTGGAAGGCATGCATATCAGCGCCACCG TATTAACCAATCTGTTTATACGCCAACAGTTACAGCTCGCCGCCGAACGGGTACGCGAAGGCACCACCCTGACGCTGGCG CTCGAACAAACCAGGCTGCTGTCGCCAATGATGGGCCATATGATCGCCAGCGGCGAAAGCAGCGGTGAACTGGACAGCAT GCTGACCAAAGCGGCCGATATTCAGGACAGCGCCTTTCTTAGCCAGATGACGCTGGCAGTCAGCCTGTTTGAACCCCTGC TGGTGGTGGTGATGGCTGGCGTGGTGCTGTTTATCGTGCTGGCCATTCTGCAACCCATTTTACAACTCAACAGCCTGATA GGATAA Protein sequence : MRFRYQALNQRGVKVQGETEADTPQQARQLLREQQLQPLRLQPVKPGVLRSGSSSRRSLSASERVLMTRQLATLVGAALP LEQALLALEKQTTKPAGRTMLHAIRQKVLEGASLADAVGLYPATFPPLYQAMIAAGEASGKLDNVLEQLADYSEKTQQIK GKLTQSMIYPLLLTLVAISVITILLTAVVPSVVEQFVHMKQALPLSTRLLMSISEITRAIGLPVLLVILLAGFCARIILR RPAQQLRWHQAKLRLPLIGRIVLNLNLARYARTLSILTNSAVPLLEGMHISATVLTNLFIRQQLQLAAERVREGTTLTLA LEQTRLLSPMMGHMIASGESSGELDSMLTKAADIQDSAFLSQMTLAVSLFEPLLVVVMAGVVLFIVLAILQPILQLNSLI G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 6e-71 | 53 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-71 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EAM_0719 | YP_003537809.1 | type II secretion system protein | VFG2049 | Protein | 2e-67 | 52 |
| EAM_0719 | YP_003537809.1 | type II secretion system protein | VFG0181 | Protein | 1e-65 | 49 |
| EAM_0719 | YP_003537809.1 | type II secretion system protein | VFG1870 | Protein | 7e-61 | 43 |
