Gene Information

Name : EAM_0056 (EAM_0056)
Accession : YP_003537157.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 87433 - 87867 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence :
ATGACCGGACGTAACAGACGCAATTTCAGCCCCGAGTTTCGCCTCGAGGCTGCCCAGCTTGTACTCGATCAGCATTACAC
CGTTGCCGCCGCTGCCACTGCGATGAATGTCGGCAAATCCACGATGGATAAATGGGTTCGACAACTGAAAGAAGAGCGAA
CGGGAAAATCACCCATAGCTTCACCCATGACACCTGAGCAGATTGAGATACGTGAGTTGAAGAAAAGACTTCAACGCGTT
GAAATGGAAAGGGATATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCACTGAACAATTCTCATTCGTTGAGAAA
CTCAGGGCGCGGTTTCCTGTTGCCGTTGTGTGCAACGTGTTTGGGGTTCATCGCAGCAGTTATAAATACTGGCGGCAGCC
CAGGAAGCCTGACGCCACGAGAGTGGCATTACTGA

Protein sequence :
MTGRNRRNFSPEFRLEAAQLVLDQHYTVAAAATAMNVGKSTMDKWVRQLKEERTGKSPIASPMTPEQIEIRELKKRLQRV
EMERDILKKATALLMSDSLNNSHSLRNSGRGFLLPLCATCLGFIAAVINTGGSPGSLTPREWHY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 5e-34 80
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 5e-34 80
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 5e-34 80
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 7e-34 80
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 5e-34 80
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 7e-34 80
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 5e-34 80
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 5e-34 80
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 3e-24 57
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 5e-24 57
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 1e-22 56
unnamed AAC31483.1 L0004 Not tested LEE Protein 9e-23 56
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 1e-22 56
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 1e-22 56
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 7e-20 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_0056 YP_003537157.1 transposase VFG1123 Protein 2e-34 80
EAM_0056 YP_003537157.1 transposase VFG0784 Protein 4e-23 56