Gene Information

Name : kdpA (EAM_3359)
Accession : YP_003540417.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 3663683 - 3665368 bp
Length : 1686 bp
Strand : -
Note : -

DNA sequence :
ATGATGGCTACCGCAAGTTTGCTGATTGGCAGCTATCTGCTGCTGCTGCTGCTGCTGGCCCGTCCGCTGGGTACAGGGTT
GGCACATCTGGTCGCCGACCGTCCGCTTACCGGGTTTGCCGCCGTCGAACGCGGGCTGTGGCGCGTCAGCGGGGTGGCAA
AGCAGGGCATGAGCTGGCAGCGCTATTTGTTGGCAATTCTGCTGTTCAACGCCGTCGGGCTGCTGCTGCTGCTTTTAATC
CTGATGAATCAGGCCAGCCTGCCGCTGAACCCGCAGCACCTGCCTGGCCTCAGCTGGGACCTGGCGCTGAACACCGCCGT
GAGCTTTATCACTAACACCGACTGGCAGGCTTATTCCGGGGAAAGCACGTTGAGCTACTTCAGTCAGATGGTTGGCCTGA
CGGTGCAGAACTTCTTCTCGGCGGCTAGCGGGATTGCCGTGGCCTTTGCGCTGATGCGCGGTTTTGCCAATCGTGCATCA
GGCGATCTGGGCAACGCCTGGCGCGATATCACCCGCATCACGCTTTACGTGCTGCTGCCGCTGTCGTTGCTGATGGCGCT
GTTTCTGGTCAGCCAGGGTACGTTGCAAAACCTGCACGGCTATCTCGATCTGACCACCCTGGAAGGGGTGAAACAGACGC
TGCCGATGGGGCCGGTGGCCTCGCAGGAAGCCATTAAAATGCTTGGCACCAACGGCGGTGGCTTCTTCAACGCCAACTCG
GCTCATCCGTTTGAAAACCCCACCGCACTGAGCAACTTTGTACAGATGCTGGCGATCTTCCTGATCCCGGCGGCGCTGTG
CTTTGCGTTTGGCGATATCGTACGCGACCGTCGTCAGGGGCATGCGCTGCTGTGGGCCATGTCGTTGATGTTCATCGGGG
CCGTTGTGGTGGTGATGTGGGCCGAAGTCAACGGCAACCCGCACTTCCTCACCCTTGGCGCTGACAGCGCTGCCAATATG
GAAGGCAAAGAAACGCGTTTCGGCATCCTGAACTCCAGCCTGTTTGCGGTGATCACCACGGCGGCATCCTGTGGCGCGGT
GAATGCGATGCACGACTCATTGACCGCCCTCGGTGGCATGGTGCCAATGTGGCTGATGCAGATTGGTGAAGTGGTATTTG
GCGGCGTTGGCTCCGGGCTGTACGGCATGCTGCTGTTTGTGCTGCTGGCGGTGTTTATCGCCGGGCTGATGATCGGCCGC
TCACCGGAGTATCTCGGTAAGAAAATCGACGTCTGGGAAATGAAGATGACCGCGCTGGCGATCCTGGTAACGCCCGCCCT
GGTGTTGCTGGGATCCGCGCTGGCGATGATGACCGATGCCGGGCGCAGCGCCATGCTTAACCCGGGAGCTCACGGTTTCA
GCGAGGTGCTGTATGCGCTCTCCTCGGCGGCCAACAACAACGGCAGCGCCTTTGGCGGTCTGAGTGCTAATACCCCATTC
TGGAATATGCTGCTGGCGTTCTGCATGCTGCTGGGGCGCTTCGGCATCATTATCCCGGTGATGGCGATCGCCGGTTCTCT
GGCGGTGAAAAAAGTCCAGCCCGCCGGTAACGGCACGCTGCCTACCCACGGCACGCTGTTTATTTCACTGCTGATTGGCA
CCGTGATGCTGGTAGGTGCACTGACCTTTATCCCGGCACTGGCCCTGGGGCCGGTGGCGGAACATTTGCAAATGCCTGGT
CATTAA

Protein sequence :
MMATASLLIGSYLLLLLLLARPLGTGLAHLVADRPLTGFAAVERGLWRVSGVAKQGMSWQRYLLAILLFNAVGLLLLLLI
LMNQASLPLNPQHLPGLSWDLALNTAVSFITNTDWQAYSGESTLSYFSQMVGLTVQNFFSAASGIAVAFALMRGFANRAS
GDLGNAWRDITRITLYVLLPLSLLMALFLVSQGTLQNLHGYLDLTTLEGVKQTLPMGPVASQEAIKMLGTNGGGFFNANS
AHPFENPTALSNFVQMLAIFLIPAALCFAFGDIVRDRRQGHALLWAMSLMFIGAVVVVMWAEVNGNPHFLTLGADSAANM
EGKETRFGILNSSLFAVITTAASCGAVNAMHDSLTALGGMVPMWLMQIGEVVFGGVGSGLYGMLLFVLLAVFIAGLMIGR
SPEYLGKKIDVWEMKMTALAILVTPALVLLGSALAMMTDAGRSAMLNPGAHGFSEVLYALSSAANNNGSAFGGLSANTPF
WNMLLAFCMLLGRFGIIIPVMAIAGSLAVKKVQPAGNGTLPTHGTLFISLLIGTVMLVGALTFIPALALGPVAEHLQMPG
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 6e-83 51
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 4e-83 51
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-74 49
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-74 49
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-74 49
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-74 49
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-74 49
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 1e-75 47