Gene Information

Name : EAM_3348 (EAM_3348)
Accession : YP_003540407.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 3648728 - 3649060 bp
Length : 333 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAACGACATTGTCGATGTCATCGTAGACTGGATCGAATGCCATATTGAAGAAGGGCCTGATATTGAAGCGGTTGC
GGCGAAATCGGGCTATTCGAAATGGCATCTGCAACGCGCCTTTAAAGCGCAGAAGGGCATCACTCTGGCGACCTTTATTC
GCGGCCGCCGCCTTGAACAGGCCGCGCAATGCCTGGTGAGTTCGAGCAAAACGATTATGGCTATCTCCATGGATCTCGGC
TTCTCTTCCCAGCAGTGTTTCCAGCGGGTGTTCAAAAAACATTTCCACATTACCCCGCGCGATTACCGCATCCGGCACCG
CCAGTTTCACTGA

Protein sequence : 
MKNDIVDVIVDWIECHIEEGPDIEAVAAKSGYSKWHLQRAFKAQKGITLATFIRGRRLEQAAQCLVSSSKTIMAISMDLG
FSSQQCFQRVFKKHFHITPRDYRIRHRQFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-22 48
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 5e-19 43
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 5e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 3e-24 50
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 4e-24 49
EAM_3348 YP_003540407.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 1e-22 48
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 3e-23 48
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 2e-22 48
EAM_3348 YP_003540407.1 AraC family transcriptional regulator BAC0371 Protein 1e-22 48
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 3e-20 44
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 3e-20 43
EAM_3348 YP_003540407.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 2e-19 43
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 2e-20 42
EAM_3348 YP_003540407.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 2e-20 42
EAM_3348 YP_003540407.1 AraC family transcriptional regulator BAC0560 Protein 2e-20 42
EAM_3348 YP_003540407.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 2e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_3348 YP_003540407.1 AraC family transcriptional regulator VFG0585 Protein 3e-23 48
EAM_3348 YP_003540407.1 AraC family transcriptional regulator VFG1038 Protein 2e-19 43