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Name : kdsD (EAM_3099) Accession : YP_003540162.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 3390779 - 3391768 bp Length : 990 bp Strand : + Note : - DNA sequence : ATGATGACGCATCTCACTGCCGAAAACGACTTTGATTTTCAACAGGCCGGAAAAGAGGTCTTGCAGATTGAACGCGAAGG CCTGGAACAACTCGACCGCTACATTAACGATGACTTTACCCGTACCTGCGATCTGATTTACCGCTGTCGCGGCAAAGTAG TCGTCATGGGGATGGGCAAATCAGGGCACATTGGCAAAAAAATTGCCGCCACCTTTGCCAGTACCGGTACGCCCGCTTTC TTTGTACATCCTGCTGAAGCCAGCCACGGCGATTTGGGCATGGTCACCTCTGACGATGTGGTGATTGCCATCTCTAATTC TGGCGAATCTTCAGAGATTTTGGCCCTGATCCCGGTGCTGAAGCGCCTGCACGTCACATTAATATGCATCACCAGCCGTC CGGAAAGTGCAATGGGGCGTGCGGCAGATATCCATCTGTGTGTTAAAGTTCCGCAAGAAGCCTGCCCGCTTGGCCTGGCA CCGACCACCAGCACCACCGCCACGCTGGTGATGGGCGATGCGTTGGCCGTTGCGCTATTGAAAGCCCGTGGCTTTACCCA GGAAGACTTTGCTCTCTCTCATCCCGGCGGGGCACTGGGGCGCAAGCTGCTGCTGCGCGTTGATGATATCATGCACTGTG GTAATGATATGCCACACGTCAGCCGTGACGCCTCACTGCGTAACGCCCTGTTGGAGATGACGCAGAAAAACATGGGGATG ACGGTCATTTGTGACGCTGCGATGCAAATCGGAGGTATCTTCACCGATGGTGATTTACGCCGCATCTTCGATATGGGCAT TGATATTCAGCACGCCAGTATTGAAAGTGTCATGACGCCAGGCGGCATTCGCGTGCGGCCTGGTACGCTGGCGGTGGATG CACTGAATCTGATGCAAACCAGGAATATCACCTGCGTCATGGTTGCCGAGAACAATCGGCTACTTGGCGTGATCCATATG CATGACATGCTGCGCGCTGGCGTAGTTTAA Protein sequence : MMTHLTAENDFDFQQAGKEVLQIEREGLEQLDRYINDDFTRTCDLIYRCRGKVVVMGMGKSGHIGKKIAATFASTGTPAF FVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICITSRPESAMGRAADIHLCVKVPQEACPLGLA PTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRKLLLRVDDIMHCGNDMPHVSRDASLRNALLEMTQKNMGM TVICDAAMQIGGIFTDGDLRRIFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVAENNRLLGVIHM HDMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-50 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 5e-50 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-50 | 42 |
