|
Name : dnaB (EAM_0296) Accession : YP_003537393.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 355160 - 356575 bp Length : 1416 bp Strand : + Note : - DNA sequence : ATGGCAGGAAATAAACCCACCAACAAATCCTACGAAAACCGCGAGCCGCGTGACCGTCAGATGGAAGGTCTGAAGCTGCC ACCGCATTCGCTGGAGGCAGAACAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAACGCTGGGATAACGTGTCGGAAC GCGTGGTCGCGAAGGACTTCTTCAGTCGCCCGCACCGGATGATCTTTGCGGAAATGCAGCGCCTGCTTGAACAGAGTAAA CCGATCGATCTCATTACCCTCTCCGAATCGATGGAAACCAAGGGCGAGCTGAGCATGGTCGGCGGCTTTGCCTATCTGGC CGAGCTGTCAAAAAATACGCCAAGCGCGGCGAATATCGGAGCCTACGCCGATATCGTGCGTGAACGTGCGGTGGTGCGCG AGATGATCGCCGTAGCGAATGAGATCGCCGATGCGGGATACGATCCGCAGGGGCGCAGCAGTGAGGATCTGCTCGATCTT GCTGAATCACGCGTATTCCAGATCGCCGAAAACCGCGCCAATAAAGATGAAGGGCCGAAAAGCGTCGATCAAATCCTCGA AGCCACTATCGCGCGTATCGAATCCTTGTATCAGACACCGCATGACGGCGTCACCGGGGTTGATACCGGCTACCAGGATC TGAACAAGAAAACCGCCGGTCTTCAGCGTTCGGATCTGATTATCGTCGCCGCCCGACCGTCGATGGGTAAAACGACCTTC GCCATGAATCTGTGCGAAAACGCGGCAATGTTGCAACAAAAACCGGTGCTGATCTTCAGCCTTGAGATGCCCGGCGAACA GCTTATGATGCGCATGCTGGCATCGCTGTCACGCGTTGACCAAACCCGCATCCGTACCGGCCAGCTCGACGACGAGGACT GGGCGCGTATCTCCAGCACTATGGGTATTCTGCTGGAGAAGAAGAACATGTTTATTGATGATTCTTCCGGCTTGACGCCG ACCGAAGTGCGTTCGCGCGCGCGCCGTATATTCCGCGAGCACGGTGGGCTTAGCCTGATTATGATCGACTACCTGCAGCT GATGCGTGTTCCGGCACTGTCCGATAACCGCACACTGGAAATCGCCGAGATATCGCGCTCGCTGAAAGCGCTGGCAAAAG AGCTACAGGTGCCGGTGGTGGCGCTGTCGCAGCTTAACCGCTCGCTGGAGCAGCGCGCCGATAAGCGCCCGGTCAACTCC GACCTGCGTGAATCCGGCTCTATCGAGCAGGATGCCGACTTAATCATGTTTATCTATCGCGATGAGGTTTACCACGAGAA CAGCGATTTGAAAGGCGTAGCGGAAATTATCCTGGGTAAACAGCGTAACGGCCCAATCGGTACCGTGCGCCTGACCTTTA ACGGGCAGTGGTCACGTTTTGATAATTACGCCGGGCCACAGTACGACGACGAATAA Protein sequence : MAGNKPTNKSYENREPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVVAKDFFSRPHRMIFAEMQRLLEQSK PIDLITLSESMETKGELSMVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRSSEDLLDL AESRVFQIAENRANKDEGPKSVDQILEATIARIESLYQTPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTF AMNLCENAAMLQQKPVLIFSLEMPGEQLMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKKNMFIDDSSGLTP TEVRSRARRIFREHGGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS DLRESGSIEQDADLIMFIYRDEVYHENSDLKGVAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-98 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 6e-105 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-104 | 53 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-104 | 53 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-90 | 50 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-90 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-84 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-78 | 44 |
