Gene Information

Name : hrpB (EAM_2886)
Accession : YP_003539953.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3152405 - 3152767 bp
Length : 363 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCAATGCCGGAAACGCCCAGTCTCTCTCCGTCAGCGCGGGGAATAATGAGGTCAGTTCTGCCGCCAGCAACAC
GGCGGATGCTTCCTGGTTCAGCGCGGCGCTGCAATCACCTGCTAAACCGGCAAGTAGTGACAATCAATCCTGGATAAACA
AAGTCACCAGCCTGTCTGAAACTGCCAGTGGCCATGCCAACCAGGCAGACAGGGCGCTGGCTAAGGTCTCGCGCAGTCTT
GATTCGCAAAGCGTGATGGCCGCTAACCGCACCTTATCCTCCTATTATCTGGAGAGCCTGCTCAACGCAAAGCTGGTGGG
TAAAGGCGTACAGAGTCTGGAAAAACTGACCAACTTGCAGTAA

Protein sequence :
MKINAGNAQSLSVSAGNNEVSSAASNTADASWFSAALQSPAKPASSDNQSWINKVTSLSETASGHANQADRALAKVSRSL
DSQSVMAANRTLSSYYLESLLNAKLVGKGVQSLEKLTNLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB AAB49173.1 HrpB Virulence Hrp PAI Protein 7e-46 100
hrpB AAT96360.1 HrpB Virulence S-PAI Protein 3e-16 50
hrpB AAT96280.1 HrpB Virulence S-PAI Protein 4e-16 48
hrpB AAT96321.1 HrpB Virulence S-PAI Protein 3e-16 48
hrpB ABA47315.1 HrpB Virulence S-PAI Protein 6e-17 42