Gene Information

Name : traF (EAM_0268)
Accession : YP_003537369.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Unknown
Product : plasmid transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 338058 - 339290 bp
Length : 1233 bp
Strand : +
Note : -

DNA sequence :
ATGACAAACAAATTCAAAGTATTAGCCTCGTTGCGACCATCGGTAGCATTGACTTCACTTTTATTAGCCCCGCTGGGTGC
GCTGGCTGCCGGTAATTATTTTGATGCCCGTAACGATGCAATGGGTGGAACTGGCGTCGCTTCTTCCACTTACGGATCGG
CGGTTCTGGCCAACCCCGCGTTGATGGTCAAGGCTCAGCCACTGGACAAAGTCAGCATTATTCTGCCGGCGGCCGGTGCG
CAGCTTAGCGATAAAAATAAACTGGTTGATAAGGTCGATGACCTTTCGGATACCGTCGATCACTACAAGGCCATGCGGGA
TAACATCACTTTTGAAGATATTCCTAACCTGCTTGCAGCCAGCGGCGATTTGGCTGACCGACTGCGTGATATCCGTGGTG
AAAAAGCCTGGGGCCAGGCCGGTGCGGCCCTTGCCGTCACGATCCCTGACTACGCGCTACCGTTTGCCTTTGTTACTAAA
GCTTACGGCTCTGCCTATGGCACCAGCAATATCACCCAGCATGATATCGACTTGTTACAGGGAATCGCAGATGCGACGAC
ATTTCCGTCTTCTGAGGACCAGCTGACCTCCACCGCACTGGGTCGGGCGGCAGTTGTTTATGATATCGGTGTTGCCGTGG
CACATGAGTTTGATATTGTCGGCCATCCGTTTTCACTGGGCGTTACGCCGAAGTTACAAAAAACCACCTTGTATAACTAC
AGCGCCTCGGTTTACAGCTATAAAAGATCGGATCTCACCGACGGTAAATATAAAAACACCGATACCGGCTTTAACCTTGA
CGTGGGGGCAGCAACCGATTTGGGTGACAACTGGACGCTGGGTCTGAGCGGCCAAAACCTGATCCCGCGCGATATCGATA
CTAAAGAAGTGAACGGATATCAGGATACTTACCAGATCCGCCCGCTGGTGACTTCCGGCGTATCCTTTCACACCGAACGC
CTGACCGCCGCGTTGGATGTCGATATCACCCCGACTAAGCGCTTTAAAATCCAGCAGGATAGCCAGTACGCGGGCATCGG
TGCCGAATATCGTCTGCTGGACTGGCTGCAATTGCGTGGTGGCTACCGTGCCGATATGAAGTCAAACGACACTAACGTGT
TTACCGGCGGTTTCGGCATATCACCTTATAACAAGGTGCACCTTGACCTCGCCGGGATGGTAGGGAAAGACAACACCTGG
GGGGCGGTCGCACAGCTGAACTTTACTTTCTAA

Protein sequence :
MTNKFKVLASLRPSVALTSLLLAPLGALAAGNYFDARNDAMGGTGVASSTYGSAVLANPALMVKAQPLDKVSIILPAAGA
QLSDKNKLVDKVDDLSDTVDHYKAMRDNITFEDIPNLLAASGDLADRLRDIRGEKAWGQAGAALAVTIPDYALPFAFVTK
AYGSAYGTSNITQHDIDLLQGIADATTFPSSEDQLTSTALGRAAVVYDIGVAVAHEFDIVGHPFSLGVTPKLQKTTLYNY
SASVYSYKRSDLTDGKYKNTDTGFNLDVGAATDLGDNWTLGLSGQNLIPRDIDTKEVNGYQDTYQIRPLVTSGVSFHTER
LTAALDVDITPTKRFKIQQDSQYAGIGAEYRLLDWLQLRGGYRADMKSNDTNVFTGGFGISPYNKVHLDLAGMVGKDNTW
GAVAQLNFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 6e-58 44