Gene Information

Name : xerD (EAM_2779)
Accession : YP_003539846.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3042747 - 3043640 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
GTGCAGGATAACGATCTGATTGAGCAATTCCTTGATGCCCTGTGGATCGAGCGCAACCTGGCGCAAAATACCGTGGATTC
TTATCGCCTCGATCTGCGCTCACTGGGTGACTGGCTGGCGCACCAGCAGCTGTCGCTGTTGAATGTGGAGGTAGCCAATC
TGCAGGAGTTTCTTGCGCAGCGCCTGGAGGGGGGTTATAAAGCCAGCAGTTCTGCGCGCCTGCTTAGCGCCATGCGCCGT
CTGTTTCAATATCTGTATCGGGAAAAGCTGCGTGATGACGACCCCAGCGCGCTGCTCTCCTCACCCAAGCTGCCGCAGCG
CCTGCCGAAGGATCTGTCGGAAGCCCAGGTAGAAAGGCTGTTACAGGCACCTTGCCTCGATCTGCCGATTGAACTGCGCG
ATAAGGCGATGCTGGAACTGCTGTACGCCACCGGTCTGCGCGTGACTGAACTGGTCGGTTTGACCCTGAGCGATATCAGC
CTTCGTCAGGGGGTGGTACGGGTGATGGGTAAAGGAAATAAGGAACGTCTGGTACCGATGGGGGAAGAGGCGGTGCACTG
GATCGAGCAGTTTATTGAGTACGGCCGCCCGTGGCTGCTCAATGGACAGACGATTGACGTGTTGTTCCCCAGTAATCGTG
CGAAACAAATGACGCGTCAAACCTTCTGGCATCGCATCAAGCATTACGCCACACTGGCAGGCATTGACAGCGAAAAACTG
TCACCCCACGTTCTGCGTCATGCTTTTGCAACCCATTTGCTGAACCACGGGGCAGATTTGCGTGTCGTACAGATGTTATT
AGGTCACAGCGATTTATCAACGACACAGATTTATACACATGTAGCGACAGAGCGCCTGCGGCAGCTGCATCAGCAACACC
ATCCACGCGCCTGA

Protein sequence :
MQDNDLIEQFLDALWIERNLAQNTVDSYRLDLRSLGDWLAHQQLSLLNVEVANLQEFLAQRLEGGYKASSSARLLSAMRR
LFQYLYREKLRDDDPSALLSSPKLPQRLPKDLSEAQVERLLQAPCLDLPIELRDKAMLELLYATGLRVTELVGLTLSDIS
LRQGVVRVMGKGNKERLVPMGEEAVHWIEQFIEYGRPWLLNGQTIDVLFPSNRAKQMTRQTFWHRIKHYATLAGIDSEKL
SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-55 59
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-55 59