Gene Information

Name : pagC (EAM_2768)
Accession : YP_003539835.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : virulence membrane protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 3028023 - 3028580 bp
Length : 558 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGTAAAAATTATGGCAATTGTTTTAGCCTTTAGCGCTCTGCCGGCCAGCTTGTTGGCGCGTGCAGACAGCCATGC
TCTGTCAATCGGCTATGCGCAAAGCCGGGTGCAGGATTTTAATAATCTGCGAGGTGTTAACGTCAAGTATCGCTATGAGC
CGGAATCTTTGCTCGGCGTCATCACGTCATTCAGCTATATGTCTGCTGGAGGAAACGTGTTTGATTCGTCCAGTTGGGAG
GACACGTATTACGACGATAGTGTAAAAGTAAAATACTTTTCGTTGCTTGTTGGTCCGGCTTACCGTATTAACAAACATGT
TTCACTTTATGCCGTTGGTGGTATAAGTAACGGTAAATCCGCTCTGACACAGAACTACCGCCATAGTAATTATACATATA
CTGAAAATTCGACTGATAACACGACTTCATTAGCTTATGGTGCTGGTGTTCAGATTAACCCTCTGGAAAACATTGTCCTC
GATATTAGCTATGAAGGAAGTAAACTGCAGCAAACAAAAATCAACGGCTTTAGTATGGGTATTGGCTATCATTTCTGA

Protein sequence : 
MNVKIMAIVLAFSALPASLLARADSHALSIGYAQSRVQDFNNLRGVNVKYRYEPESLLGVITSFSYMSAGGNVFDSSSWE
DTYYDDSVKVKYFSLLVGPAYRINKHVSLYAVGGISNGKSALTQNYRHSNYTYTENSTDNTTSLAYGAGVQINPLENIVL
DISYEGSKLQQTKINGFSMGIGYHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 9e-33 49
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 2e-26 42
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 1e-26 42
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 6e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_003539835.1 virulence membrane protein VFG0442 Protein 2e-31 44