|
Name : EAM_2672 (EAM_2672) Accession : YP_003539739.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2910980 - 2911747 bp Length : 768 bp Strand : + Note : - DNA sequence : ATGATAAAATACTCTTTTCGGTCTATTGTTATTCTACTGACTGCCGCCCTGACCTCTGGCTGCAATGATGAAAAATTACT TGATAACCTGACTCAGTCACAAGCTAATCATGTCGTTGCCATCTTGCAGCAGCATAATATTTCCGCACATAAAAATGGCA ATCTGAAAGCCGGCTATGTAATAACCGTTGGGCAGTCCGAAAATACAGCTGCACTTTCCATTATCAATCAGTACCAGCTG CCTTGGTCTGCGGATGTTCAAATCGGCGAAGCTTTCCCAAGTGGGTCTTTGGTCGCCTCACCGAATGCGGAACAGGCCAG GGTACTTTCGTTACAGGAACAAAGACTGGAACAATCACTAAGGATCATTGCTCAGGTCGTGAATGCTCGTGTACATTTAA GCTATCCTTCCTTCAACAATGACATCAGCGCAAAAAAATCCGTAGGTCATGTCGGTGTACTTATCTCATATAAGGGAGAA ATCGATGAGACCATGTTTATACCTCAGATTAAATCACTCATAAAAAACAGTCTGGATGATGTGCTTTATGAAAATATTTC TGTTGTACTTTTCCCGGCCCCCATTATCCAGTATTCAACCCCGTTGAAGGCTCCCACCAACATTGCCAGTAAATGGTTAA TTATGCTTGCGCTAACCTTATTCTTAGCGGTAGCAACGGGAGGATATTTGTTTTATCAGTACATTTCTCGTCCGGTTAAA CAAAAATCACCTTCCCCCAAAAAAGAAGAGGGGTTAAATGAAGCATGA Protein sequence : MIKYSFRSIVILLTAALTSGCNDEKLLDNLTQSQANHVVAILQQHNISAHKNGNLKAGYVITVGQSENTAALSIINQYQL PWSADVQIGEAFPSGSLVASPNAEQARVLSLQEQRLEQSLRIIAQVVNARVHLSYPSFNNDISAKKSVGHVGVLISYKGE IDETMFIPQIKSLIKNSLDDVLYENISVVLFPAPIIQYSTPLKAPTNIASKWLIMLALTLFLAVATGGYLFYQYISRPVK QKSPSPKKEEGLNEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaJ | AAS66833.1 | YsaJ | Not tested | SSR-1 | Protein | 2e-51 | 53 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 1e-25 | 42 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 1e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EAM_2672 | YP_003539739.1 | type III secretion system protein | VFG0533 | Protein | 5e-26 | 42 |
| EAM_2672 | YP_003539739.1 | type III secretion system protein | VFG1787 | Protein | 4e-24 | 42 |
