Gene Information

Name : EAM_2670 (EAM_2670)
Accession : YP_003539737.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2910340 - 2910609 bp
Length : 270 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAACATTGAAAATAAAACCACTGCCTTATCTGATAACGGCTACTTTTTAGACGAAGTTTCACAGAAATTTGAGGC
TGGCGCTGCAAATATGATAACAGAGCTAACTAAAGCTGAAGAGGCTCTTGAAAAAGATCCCTCTAACCCGGCAGTGCTGG
CTAGCTATCAAGCGAAATTACAAGAATACACGCTGTTTCGAAACGCTCAAACCAGTACGGTTAAAGCCTACAAAGATATT
GGTGCTGCTATTATCCAAAACTTCCGCTAA

Protein sequence :
MANIENKTTALSDNGYFLDEVSQKFEAGAANMITELTKAEEALEKDPSNPAVLASYQAKLQEYTLFRNAQTSTVKAYKDI
GAAIIQNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 2e-17 61
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 2e-17 61
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 4e-21 60
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 8e-18 59
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 8e-18 59
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 6e-18 59
ECs3718 NP_311745.1 EprI Not tested LIM Protein 4e-15 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_2670 YP_003539737.1 type III secretion system protein VFG0535 Protein 2e-18 59
EAM_2670 YP_003539737.1 type III secretion system protein VFG0996 Protein 4e-17 50
EAM_2670 YP_003539737.1 type III secretion system protein VFG2466 Protein 2e-14 43