|
Name : EAM_2667 (EAM_2667) Accession : YP_003539734.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2905997 - 2907751 bp Length : 1755 bp Strand : - Note : - DNA sequence : GTGGTAAAAATTAGTTTCAGCCTGGTGGCTCTGCTTGGTACGCTTTTTTGTATCAGCAGTTCAGCGGCAATGCTCAGCGA TAATGTTGTTCGAGGCGGTGCTTACCAACGTGCTGATAACGCTGACGATACAGAGAATACCTACGTTGCAAGCAACAATA GTGTGCAGCAACTCTTCTATGTTCTCGGCGGGGCAATAAACAAGCCTGTTATCGTCAGCGGCGAAGCAGCGAAAAAGCGA GTTTCGGGTAATTTCGATCTGAGTAAACCACAAGAGTTATTGTCGACGTTAGCCACGCGCACAGGGCTTATCTGGTACGA TGACGGTAGTTCAATTTACATCTATGATGCCAGCGAAATAAAAAGCAGCATGGTCAGACTTTCCTATGCTCCGTTTGACC GTCTGCTTGCATATTTAAAGTCTTCGGGGCTTTATGATCCGCGTTTTCCACTGCGTTCTGATGGTAGTGCGGGCGCCTTT TATATTTCCGGTCCGCCGGTATATGTAGAATTAATTAGCGCGGCAGCAAAATATATTGATGCAACTTATGCCAAACCGGG GACTGGCGAAAGTACCATCCGTGTGATTAAACTAAAAAACAGTTTTGTCAACGATCGTACTTATTTACAGCGCGATGCTC CTGTCACCATACCCGGTGTCGCCACGGTGCTTAACCAGTTATTAAACAATAAGCAGGCTAATTCTGGCAGGAATACCACT GCAGCACAGATAACGGTTGATAACAGTACCCAACAGGCACTCCAAGCAGCATCAGCTAATCAGGATGGGAATTTTCGCCC TTTACCCATTTTTGCCGCAACTTCACAGGCCGAGTCTGGAGGTAATAATGATATTGCAGCCATTGAGCAGAATTCTGTCA ACATCGTAGCCTATACTGATACCAATAGCCTGCTGGTTCAAGGATCGGCACGTCAGGTCAGCTTTGTTGAAGATTTGGTG AGTGCCATCGATATTCCTAAACAACAGATTCAACTCTCGTTATGGATAATCGATGTTTCTAAAGATGATATTAATGAGCT TGGCGTACGCTGGCAGGGGAGCGCAAAAGTTGGCAATGGCGGCATCACTTTTAACACCAGCTCGCTTACTCAGGCAAATA GTATTCACTTCCTGGCTGATGTATCGGCACTTGCTCAGAAGGGTAATGCCCATGTCGTTTCTCGTCCAGAAATTCTTACG CAAGAAAATGTTCCGGCGCTGTTCGATAATAATAGTAGTTTTTACGCTAAAATGATTGGAGAACGCACCAGTTCATTGGA AAAGATCACTTACGGTACCATGATTAGCGTGCTTCCACGTCTCGACCAGTATCAGCATGAGATTGAGATGATCCTGAATA TTCAGGATGGTGGATTGCCCCTTAATCTAAACGGCGCGACAGAAACTGTTGATAGTCTACCGGTGGTAAGTAATACGCAA ATCAGTACTGAAGCAAGAGTACCGGTTGGCTATAGCTTGTTAGTGGGTGGTTATAGCCGGAACCAGGATGAGCAACACAG TTTAGGCATTCCTCTTTTACGCGATATTCCTTATATGGGGAGATTGTTCGACTACAGTTATGTCAGTCATAAAAAGATGG TTCGGTTATTTCTTATTCAGCCCCGACTAATGGTAAATGGAGAAACGTGGTCAGGTCATAATGATAACAACCCGGTTCTT GGGCGCACTTTAGATGGTGATGAAGTTACGTTGAAATCGACCGTGCATATGTTGCGTGAAACGATGAAACAATAA Protein sequence : MVKISFSLVALLGTLFCISSSAAMLSDNVVRGGAYQRADNADDTENTYVASNNSVQQLFYVLGGAINKPVIVSGEAAKKR VSGNFDLSKPQELLSTLATRTGLIWYDDGSSIYIYDASEIKSSMVRLSYAPFDRLLAYLKSSGLYDPRFPLRSDGSAGAF YISGPPVYVELISAAAKYIDATYAKPGTGESTIRVIKLKNSFVNDRTYLQRDAPVTIPGVATVLNQLLNNKQANSGRNTT AAQITVDNSTQQALQAASANQDGNFRPLPIFAATSQAESGGNNDIAAIEQNSVNIVAYTDTNSLLVQGSARQVSFVEDLV SAIDIPKQQIQLSLWIIDVSKDDINELGVRWQGSAKVGNGGITFNTSSLTQANSIHFLADVSALAQKGNAHVVSRPEILT QENVPALFDNNSSFYAKMIGERTSSLEKITYGTMISVLPRLDQYQHEIEMILNIQDGGLPLNLNGATETVDSLPVVSNTQ ISTEARVPVGYSLLVGGYSRNQDEQHSLGIPLLRDIPYMGRLFDYSYVSHKKMVRLFLIQPRLMVNGETWSGHNDNNPVL GRTLDGDEVTLKSTVHMLRETMKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaC | AAS66838.1 | YsaC | Not tested | SSR-1 | Protein | 6e-142 | 59 |
| ECs3733 | NP_311760.1 | EivG | Not tested | LIM | Protein | 1e-105 | 44 |
| invG | NP_457292.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-101 | 43 |
| invG | NP_806501.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 2e-101 | 43 |
| invG | NP_461819.1 | outer membrane secretin precursor | Virulence | SPI-1 | Protein | 1e-101 | 43 |
| invG | YP_217817.1 | invasion protein; outer membrane | Virulence | SPI-1 | Protein | 1e-101 | 43 |
| invG | AAS66859.1 | InvG | Not tested | SSR-2 | Protein | 2e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EAM_2667 | YP_003539734.1 | type III secretion system protein | VFG1782 | Protein | 4e-102 | 43 |
| EAM_2667 | YP_003539734.1 | type III secretion system protein | VFG0559 | Protein | 6e-102 | 43 |
| EAM_2667 | YP_003539734.1 | type III secretion system protein | VFG1004 | Protein | 7e-96 | 43 |
