Gene Information

Name : EAM_2658 (EAM_2658)
Accession : YP_003539725.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 2897776 - 2898030 bp
Length : 255 bp
Strand : -
Note : -

DNA sequence :
ATGAATAATGTTTTATTTATTGGCAACTCCGCACTGATTATCGTGCTGAAGTTAACGGCAGTCCCTATTGCATTGGCCAC
AGTTGTGGGCATTTTTGTCGGTCTTTTTCAAACGGTAATGCAAATTCAGGAACAAACGTTACCATTTGGTCTAAAGATGC
TGGCAGTGTTTGCCAGCATCTTTATGCTGATTGAATGGTTTTCTGCTGAAATGATGAATTTCGCGATCCAGGCTTTCTAC
ATGGCCTTTCGGTGA

Protein sequence :
MNNVLFIGNSALIIVLKLTAVPIALATVVGIFVGLFQTVMQIQEQTLPFGLKMLAVFASIFMLIEWFSAEMMNFAIQAFY
MAFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 5e-24 67
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 9e-17 52
epaQ AAZ31292.1 EpaQ Virulence ETT2 Protein 2e-15 50
ECs3724 NP_311751.1 EpaQ Not tested LIM Protein 3e-15 49
spaQ YP_217808.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 2e-15 45
spaQ NP_457283.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-15 45
spaQ NP_806492.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-15 45
spaQ NP_461810.1 needle complex export protein Virulence SPI-1 Protein 2e-15 45
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 5e-10 42
hrcS ABQ88360.1 HrcS Virulence Hrp PAI Protein 2e-05 41
hrpO AAB05076.1 HrpO Virulence Hrp PAI Protein 2e-05 41
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 2e-08 41
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 2e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_2658 YP_003539725.1 type III secretion system protein VFG2454 Protein 3e-14 50
EAM_2658 YP_003539725.1 type III secretion system protein VFG1772 Protein 2e-17 48
EAM_2658 YP_003539725.1 type III secretion system protein VFG0043 Protein 1e-09 46
EAM_2658 YP_003539725.1 type III secretion system protein VFG0550 Protein 5e-16 45