Gene Information

Name : EAM_2655 (EAM_2655)
Accession : YP_003539722.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1729
EC number : -
Position : 2895191 - 2895736 bp
Length : 546 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAGCGTAATTGATTTGCTCCATGATGACGATGCGATGAAAAGCGACAGCGAACTGGATGAACAGTCGAGCGCGCT
GCTTGATGCGATCCAAAACGGTGCGACATTAAAAGATGTGCATAATGTTTCTGATGAAGTCATGGATGATGTTTATAAGC
TGGCTTATGAGTTCTATATAAACGGTAAGTTGAAAGATGCCGAATCACTTTTTCGCTTCTTGTGCATCTATGATTTTTAC
AATCCTGAGTATGCGATGGGTTTAGCAGCTGTGAATCAGCTGAAGAAAAATTATACCAAAGCGATAGACTTATACGCTCT
GGCTTACTCTTTGGCAAAAGATGATTATCGGCCGATGTTTTATGCCGGACAGTGCAACTTAATGCTACGTCGTGCTGTCC
AGGCGAGGAAATGTTTTGAAACTGTCGTTAGCAAATGCAGCGATACGCAATTAATTGCAAGATCACAGAGTTATCTGTCC
GCGCTAGATGAAGTTGATAATAGTGAATCGGATGATTCTGTTAGATGTGTTAATAGGAATTCATAA

Protein sequence : 
MKSVIDLLHDDDAMKSDSELDEQSSALLDAIQNGATLKDVHNVSDEVMDDVYKLAYEFYINGKLKDAESLFRFLCIYDFY
NPEYAMGLAAVNQLKKNYTKAIDLYALAYSLAKDDYRPMFYAGQCNLMLRRAVQARKCFETVVSKCSDTQLIARSQSYLS
ALDEVDNSESDDSVRCVNRNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 5e-40 57
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 5e-40 57
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 5e-40 57
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 5e-40 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_2655 YP_003539722.1 type III secretion system protein VFG2451 Protein 5e-45 62
EAM_2655 YP_003539722.1 type III secretion system protein VFG0547 Protein 1e-40 57
EAM_2655 YP_003539722.1 type III secretion system protein VFG1769 Protein 5e-37 53
EAM_2655 YP_003539722.1 type III secretion system protein VFG0988 Protein 8e-39 50