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Name : fliP (EAM_2570) Accession : YP_003539639.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2804064 - 2804807 bp Length : 744 bp Strand : - Note : - DNA sequence : ATGAAGCCCCGTACCGTGTTGCGCACGCTGTTGCTGATCGCGGGCATGCTGCCAGCGGTTGGCGCGCTGGCGGCCAACAG CGATATCACCCTGGCCAGCCCGCAGGGCAATGGCGGCTGGACGTTGCCGGTGCAAACGCTGGTACTGCTTAGCTCGCTGA CCTTTTTACCCGCAATATTACTGATGATGACCGGCTTTACCCGCATCATTATTGTGCTGGGACTGATGCGCAATGCCCTG GGAACGCCAACGTCTCCGCCCAATCAGGTACTGGTTGGCCTGGCGCTGTTCCTTACTTTCTACGTGATGTCGCCGGTATT CAATCAGATATACGAGCAGGCCTGGCAGCCGCTGCAGGAAGACAAAATCACCATGGAAGTCGCTCTGGAGCAGGGCGTTA AGCCGCTGCGTGCCTTTATGCTGGACCAGACGCGGGAAAATGATTTGGCGATGTTTGCGCAAATGGCCAAAGCCGGTGAA TTTAAAGGACCGGAAGAGGTACCGCTCGGCATTCTGGTGCCGGCCTTTGTCACCAGCGAACTGAAAACCGCCTTCCAGAT TGGTTTTACTATCTTTATTCCGTTTCTGATTATTGACCTGGTGGTTGCCAGTATTCTGATGGCGCTCGGGATGATGATGG TGCCTCCGGCGACTATCGCCTTGCCTTTCAAACTGATGCTGTTCGTGCTGGTCGACGGCTGGCAGCTGCTGATGGGTTCG CTGGCACAGAGTTTCTACAGTTAG Protein sequence : MKPRTVLRTLLLIAGMLPAVGALAANSDITLASPQGNGGWTLPVQTLVLLSSLTFLPAILLMMTGFTRIIIVLGLMRNAL GTPTSPPNQVLVGLALFLTFYVMSPVFNQIYEQAWQPLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQMAKAGE FKGPEEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIALPFKLMLFVLVDGWQLLMGS LAQSFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-28 | 46 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-28 | 46 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-28 | 46 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 3e-29 | 44 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-22 | 42 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-22 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-30 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-31 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-21 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 1e-21 | 41 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-31 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-31 | 41 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-31 | 41 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-31 | 41 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-31 | 41 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-30 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-30 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-30 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 2e-31 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 2e-29 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 2e-29 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-28 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-29 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-29 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 2e-29 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 2e-29 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 2e-29 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-29 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 2e-29 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 2e-29 | 41 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 1e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG2338 | Protein | 5e-78 | 73 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG2494 | Protein | 7e-72 | 67 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG1259 | Protein | 1e-62 | 57 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG2016 | Protein | 5e-59 | 56 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG0044 | Protein | 2e-33 | 44 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG0188 | Protein | 1e-33 | 43 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG0394 | Protein | 5e-33 | 43 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG0827 | Protein | 1e-29 | 41 |
| fliP | YP_003539639.1 | flagellar biosynthetic protein | VFG0715 | Protein | 7e-29 | 41 |
