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Name : kpsC (EAM_2536) Accession : YP_003539605.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 2769212 - 2771236 bp Length : 2025 bp Strand : - Note : - DNA sequence : ATGATTGGCATTTATTCTTCCGGCATCTGGCGTATTCCCCACCTGGCTAACTTTCTGCGTGAGCGTTGCCACAAAGTCGC GCTGCGCCATGCTCTGCCCGCAGAGGTGGATGCAATAGCCGTATGGGGTTATCGTCCATCAGGTAAAAAAGAGGTTCGGG CTGCCCAATCCGCCGGCAAGACCCTGATGCGACTAGAGGACGGCTTTATCCGTTCGCAGGGGCTGGGAGTAGAGGGCGCG TCGCCATTTTCCATGGTCGTTGATCGTCTTGGCATGTACTACGATGCCGGGCGCCCCAGTACGCTTGAGCGCATGATCCA GGACACGCCAGGTAACAGCGTGCTGGCGGCGGAAGCGGAAGATGCCATGCGGACCATTGTTAACGAAGATCTCTCCAAAT TTAATCACGCTCTGCCGTTTAAACGCACAACGCCGATACCGTCTGAAGTCGTGCTGGTGGTGGATCAAACCGCTGGCGAT CTGTCAGTCAAGTGGGGCGGTGGCGGCGCGACTGATTTTAGCCGCATGGTAAATGCAGCGCTGAGCGAAAATCCTAACGC GACAATCTGGGTCAAGGTTCATCCTGATGTCCTGAGTGGTTCCAGACAGGGCTATTTAGGTGCAGTAGAGTTGGATGACC GGGTCCACCTGTTCACCGAGGATGTCAGCCCGCAATCTTTGCTGCGTGTAGTGACTAAAGTCTATGTTGTTACCTCGCAG TTAGGTTTCGAGGCGTTGCTGGCGGGTAAACCGGTAGTGTGTTTCGGTCTGCCGTGGTATGCCGCCTGGGGGCTGACCGA CGACCGTCACTCTGGTGCCGTCTGCCTGGCGCAACGGCGGGGGCGCGCCTCGCTGACCGCGCTGTTTACCGCTGCCTATT TGCGCTACAGCCGCTATATTCATCCCTCAAACGGGCAACCTGCAAGACTGAGCGAAGTCCTTGAATGGCTGGTGCGTGAG CGCCAGCACGGCCTGCAACGTGTCGGACATTTATGGGCACCCGGGCTTCCGCTGTGGAAAGCAACGATGGTGAAACCGTT TTTGCACACGCGTGATAATCAGCTGACCATGGCCAGGCGTTGCCGACCGGCAGAAGCTTGCGTGGTTTGGGGGATCAAAG GAGAGCGCCGCTGGAGCAAGCTGGCACAACAACGCGGTATTCCCGTCTGGCGCATGGAAAATGGCCTTTTACGTTCCAGC GGACACGGATCGGCTCAGAAGCCGCCGCTGTCGCTTGTGCTTGATAAACAGGGCATCTATTACGATGCGCGTCGCCCGAG CGATCTGGAACAGATGCTGAATAACAGCCAGCTTTCAGCGCAGCAAGCGACAAGAGCGCAGCGGCTTCATCAACGGCTGG TGGAGCAGCGCACCGGCAAACAAAACGTTGGCCATTTCCGGCTGCCTGACGCCGCAGCTCATCGCCTGGCGATACTGGTA CTGGGGCAGGTGGAAGACGATATTTCGCTCGCCACCGGAGCGCTCGGGGTGCGTACCAATCATGATTTATTACATCGCGT GCGCGAAGATTATCCCCAGGCATTTATTTTTTATAAGCCACATCCGGACGCGCTGACGGGAGATATGAAGGGGGATATTT CACCTGATGCACTGAGCGGCCTGGCGGATTTCGACGCGCGCGACGTCGATATTATCCAGTGCATCATGCAGGCAGATGAA GTGCATACCATGACTTCGCTGTGGGGATTTGAAGCGCTGCTGCACGGAAAACGTGTTCATTGCTACGGATTGCCTTTCTA TGCAGGTTGGGGGCTAACGGACGATGAGTTTCCTTGCGCCCGTCGCACGCGCAAACTGACGCGAAACGATCTGATTTATC AGGGACTGATCGCTTATCCCACCTATCTTGATCCTCATAACTATACGGTGATTAGCCCTGAGGATGCGGTGGAAATATTA GTAGAAACGCCGCATGGCAGGCCGTGCACCATGAAAAGAATTCGCCGCAGGATCCGGCACTATTTCCGCCAGCTAATGAT GTTTATCAAGCTCAAGCTGTTCTGA Protein sequence : MIGIYSSGIWRIPHLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGKTLMRLEDGFIRSQGLGVEGA SPFSMVVDRLGMYYDAGRPSTLERMIQDTPGNSVLAAEAEDAMRTIVNEDLSKFNHALPFKRTTPIPSEVVLVVDQTAGD LSVKWGGGGATDFSRMVNAALSENPNATIWVKVHPDVLSGSRQGYLGAVELDDRVHLFTEDVSPQSLLRVVTKVYVVTSQ LGFEALLAGKPVVCFGLPWYAAWGLTDDRHSGAVCLAQRRGRASLTALFTAAYLRYSRYIHPSNGQPARLSEVLEWLVRE RQHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARRCRPAEACVVWGIKGERRWSKLAQQRGIPVWRMENGLLRSS GHGSAQKPPLSLVLDKQGIYYDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTGKQNVGHFRLPDAAAHRLAILV LGQVEDDISLATGALGVRTNHDLLHRVREDYPQAFIFYKPHPDALTGDMKGDISPDALSGLADFDARDVDIIQCIMQADE VHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDEFPCARRTRKLTRNDLIYQGLIAYPTYLDPHNYTVISPEDAVEIL VETPHGRPCTMKRIRRRIRHYFRQLMMFIKLKLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 58 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 58 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 3e-128 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_003539605.1 | capsule polysaccharide export protein | VFG0704 | Protein | 1e-113 | 45 |
| kpsC | YP_003539605.1 | capsule polysaccharide export protein | VFG0692 | Protein | 2e-127 | 45 |
| kpsC | YP_003539605.1 | capsule polysaccharide export protein | VFG0259 | Protein | 1e-128 | 45 |
