Gene Information

Name : rfbB (EAM_2156)
Accession : YP_003539231.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : O-antigen export system ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 2310836 - 2311576 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGTTGTAATTGAATTCATTAATGTAACTAAATCATACCCGTTATACCATCACATCGGATCAGGCATTAAAGAGCT
TATTTTCAATCCACGTAGAGCCTTGAGTTTATTAAGTGGTCGCAGTTATCTTGCAATTGAGCATATAAACTTCAGGATCG
AAAAAGGGGAGTCCGTAGCATTAATTGGCCGAAACGGTGCTGGAAAGAGTACATCCCTCGGTTTGGTCGCTGGTGTATTG
AAACCAACAGTAGGGAAAGTTAATGTCGTCGGACGCGTGGCATCGATGCTGGAGCTAGGTGGTGGATTTCATCCTGAGTT
AACTGGCAGAGAAAATATAAGGCTGAACGCCACTCTTTTGGGATTACGCCGCAAAGAGCTTAAAGCCCGAATAAACGATA
TTATCGAGTTTTCTGAATTAGGCGAATTCATTGACGAACCCATACGAGTCTACTCTAGCGGTATGCTGGCAAAGCTCGGT
TTTTCTGTTATTTCGCAGGTCGATCCGGACATATTAATTATTGATGAAGTGCTGGCAGTCGGCGACATCGCCTTCCAAAG
GAAATGCATCAAAACTATAAATGAATTCAAAAGAAAGGGCGTCACCATTCTCTTTGTTAGCCATAATTTATCCGATATCG
AAAAAGTATGTGATCGAGTTATCTGGATCGAAAATCATCGCTTAAAAATGACTGGTAGATCCAGTGAAGTTATCAGTGCC
TATAAAACTGCAATGGCTTAA

Protein sequence : 
MSVVIEFINVTKSYPLYHHIGSGIKELIFNPRRALSLLSGRSYLAIEHINFRIEKGESVALIGRNGAGKSTSLGLVAGVL
KPTVGKVNVVGRVASMLELGGGFHPELTGRENIRLNATLLGLRRKELKARINDIIEFSELGEFIDEPIRVYSSGMLAKLG
FSVISQVDPDILIIDEVLAVGDIAFQRKCIKTINEFKRKGVTILFVSHNLSDIEKVCDRVIWIENHRLKMTGRSSEVISA
YKTAMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 7e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rfbB YP_003539231.1 O-antigen export system ATP-binding protein VFG0258 Protein 3e-26 41
rfbB YP_003539231.1 O-antigen export system ATP-binding protein VFG0696 Protein 5e-26 41
rfbB YP_003539231.1 O-antigen export system ATP-binding protein VFG2228 Protein 4e-34 41