|
Name : EAM_1568 (EAM_1568) Accession : YP_003538650.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 1686866 - 1687963 bp Length : 1098 bp Strand : + Note : - DNA sequence : TTGCATAATGGCACAAAAGACAGAACTACCGACGGAAAAAAACGTAAAGATTCGGCCAAAAAGGGACATTCTTTAAAAAT TAAGGATTTTGTTACAACAGTCACTCTCATTTCAGGTAGCTACTTTCTACTGCATGGTATGGATTTCAGCCGTTTCATTG ACTGTTATACTAATATTCTGATCGATGTATCATCAGTAAACATCAATGATTTTATGCTACAAATGATGTACATTTTTTTA GGGCTTTCATTCCCTTTAATAGGCATTTGTACTCTTTCTGGAATGATAGCCACGTTGTGTCAAACCCGCTTTACTATCGC CACGCAAGCTCTTAAGCTTAACTTCAAAGCTTTAAATCCTGTAGAAGGTTTAAAAAGGATTTTTAGCATGAGAACTATAA AGGAATTCGTAAAATCTCTGTGCTATCTGATGGTTTTCTCATGCACTTGTTACAATCTTATCGTTAATGATCTAAAACAT GCACTGGTCATTCACTATGCTGGAATCGCACAGTTGATCGTGAGTATGCTGTCATTGACCGTCAAAGCGGTTACGATATT TATTGCTTACTCGTTAGTTGTTCTGTGTGCTGATTTTATCATGGAATATTTTCTACATGTTAAAGATTTAAAAATGGATA AACATGAGGTTAAACAAGAGCGTAAAGAAAGTGACGGAAACCCACAAATAAAAAGTGCCAGGCGAAGAGCCCATCAGGAA CTGCTTTCCGGGGAAGAGATGGCGGCTGTAAGAAAATCGTCGGTAATTATGGTAAATCCAACTCATATTGCTATGGCAAT TTTTTTTAATCCCGAATTAGCCCCTTTACCTTTCATTGCATTACGAGCCTCTAACTTTAAAGCCAGAGCTGTGTTGGTCT ATGCTGAGAAAATCGGAATCCCTGTCGTACGCAATATTTTTTTGACACGACGTCTTTATAAATCATACGTTCAGCACAGC TTTATTTCACTCAATGATGATGATTTAATGGCAATTATGGATATTCTTATTTGGCTGCGTCAGGTAGAGATCACAGGCAT GGAAAACGGAATACCTCCGAGCGATCTTAAGAACGATGAACACCCAATGAATCAATAA Protein sequence : MHNGTKDRTTDGKKRKDSAKKGHSLKIKDFVTTVTLISGSYFLLHGMDFSRFIDCYTNILIDVSSVNINDFMLQMMYIFL GLSFPLIGICTLSGMIATLCQTRFTIATQALKLNFKALNPVEGLKRIFSMRTIKEFVKSLCYLMVFSCTCYNLIVNDLKH ALVIHYAGIAQLIVSMLSLTVKAVTIFIAYSLVVLCADFIMEYFLHVKDLKMDKHEVKQERKESDGNPQIKSARRRAHQE LLSGEEMAAVRKSSVIMVNPTHIAMAIFFNPELAPLPFIALRASNFKARAVLVYAEKIGIPVVRNIFLTRRLYKSYVQHS FISLNDDDLMAIMDILIWLRQVEITGMENGIPPSDLKNDEHPMNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 3e-77 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EAM_1568 | YP_003538650.1 | type III secretion system protein | VFG1770 | Protein | 2e-47 | 42 |
