Gene Information

Name : EAM_1554 (EAM_1554)
Accession : YP_003538636.1
Strain : Erwinia amylovora ATCC 49946
Genome accession: NC_013971
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1673533 - 1673805 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence :
GTGACAGATCCTATCCAAGATAAAGGCACACCAAGTTCAGAAAAGGGGCATTTTTTAAATAACATTTCTGAGGCGTTCGA
GGATGGGGCAAAAAATATGATGCTTGCCCTCAACGTTGCTCAAGCTAACCTTGAACTTAACCCTTCCGATCCTTCAGTAC
TGGCTAGTTATCAAGCAAAGCTGCAAGAATATACTTTATTCCGGAACGCTCAAACCAGCACCATAAAAGCTTATAAAGAT
ATTGCTGCCGCAATAATACAGAATTTTCGTTAA

Protein sequence :
MTDPIQDKGTPSSEKGHFLNNISEAFEDGAKNMMLALNVAQANLELNPSDPSVLASYQAKLQEYTLFRNAQTSTIKAYKD
IAAAIIQNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 1e-12 55
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 3e-09 51
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 3e-09 51
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 2e-09 51
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 2e-09 51
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 2e-09 51
ECs3718 NP_311745.1 EprI Not tested LIM Protein 2e-07 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAM_1554 YP_003538636.1 type III secretion system protein VFG0996 Protein 1e-10 55
EAM_1554 YP_003538636.1 type III secretion system protein VFG0535 Protein 6e-10 51
EAM_1554 YP_003538636.1 type III secretion system protein VFG2466 Protein 2e-10 51