|
Name : kdsB (EAM_1346) Accession : YP_003538432.1 Strain : Erwinia amylovora ATCC 49946 Genome accession: NC_013971 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 1463090 - 1463836 bp Length : 747 bp Strand : + Note : - DNA sequence : ATGAGTTTTGTTGCCATCATTCCTGCCCGTTTCGCTTCTACCCGGCTACCGGGAAAACCGTTGATGGATATTCACGGTAA ACCGATGGTGGTACATGTTATGCAACGTGCACAGGAATCGGGAGCCGGGCGAGTGATTGTGGCGACGGATCATGCTGACG TGGCGCGTGCGGTGGAAGCAGCCGGTGGCGAAGTCTGTATGACTCGGGTCGATCATCAGTCCGGGACTGAGCGTCTGGCA GAAGTGATTGATTACTATCAATTCCCCGACGACAAGGTGATTGTTAACGTTCAGGGCGATGAGCCGATGATCCCCCCGGT CATAATCCGTCAGGTTGCAGAAAACCTTGCGCAGCGCAGCGTAGGGATGGCAACGCTGGCAGTGCACCTGGATTCTGTGG AAGAAGCGTTTAACCCCAATGCGGTGAAAGTAGTACGCGATGCCCAGGGTAACGCGCTGTACTTCTCCCGTGCCACCATC CCGTGGGATCGCGAGCGCTTTGCCGTATCACGTGACAATATTGGCGACCACTTTCTGCGCCATATTGGTATCTACGGCTA TCGCGCCGGTTTTATCCGCCGCTATGTGCGTTGGCAAGCCAGCCCGCTGGAGCAGATAGAGCTGCTGGAACAGTTACGCG TGCTGTGGTACGGCGAAAAAATTCACGTTGATGTGGCGCAAGCGGTTCCCAGCCCAGGGGTGGATACGGCAGAAGATCTG TTACGCGTGCGCGCTGCCATGCAGTAA Protein sequence : MSFVAIIPARFASTRLPGKPLMDIHGKPMVVHVMQRAQESGAGRVIVATDHADVARAVEAAGGEVCMTRVDHQSGTERLA EVIDYYQFPDDKVIVNVQGDEPMIPPVIIRQVAENLAQRSVGMATLAVHLDSVEEAFNPNAVKVVRDAQGNALYFSRATI PWDRERFAVSRDNIGDHFLRHIGIYGYRAGFIRRYVRWQASPLEQIELLEQLRVLWYGEKIHVDVAQAVPSPGVDTAEDL LRVRAAMQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-33 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-33 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-33 | 45 |
